| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1653 |
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| Symbol | |
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| ID | 4437714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | - |
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| Start bp | 1540826 |
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| End bp | 1542994 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639677245 |
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| Product | bacteriocin/lantibiotic ABC transporter |
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| Protein accession | YP_820994 |
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| Protein GI | 116628375 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.521591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGGGT TTGGTATGTT TCGTTTTCGT AGGACTTTTG TCCCTCAAAT AGACATGAGG
GATTGTGGAG TTGCTGCCTT GGCATCAGTG GCCAAGTACT ATGGTTCAGA TTATTCATTA
GCACATCTGC GTGAGTTGGC GAAGACCAAT AAAGAAGGGA CAACTGCCTT AGGTCTTGTA
GAGGCTGCTA AAAAAATTGG CTTTGAAACG AGAGCTATAA AGGCTGAAAT GTCGCTCTTT
GAGATGGAAG ATGTTCCTTA TCCTTTTATT GCTCATGTTA ATAAAGATGG GAAGCTTCAA
CATTATTATG TTATTTATAA AAGCACCAAG GATTATCTGA TAATTGGAGA CCCTGATCCA
AGTGTAAAAG TAACTAAAAT GACTAAAGAG CGTTTTGAGA AAGAGTGGAC AGGTATTACT
CTTTTTATGG GACCGGAACC CAGTTATAAA CCACATAAGG ATAAGAAAAA TGGACTCTGG
GACTTTCTCC CTTTGATCTT TAAACAAAGG TCCTTGATAG CTAATATTGT CTTTGCCAGT
CTCTTGGTTA CTTTAATAAA TATTTTAGGT TCCTATTATT TACAAGGTAT TCTAGACGAA
TATGTCCCTA ATCAAATGAA GTCTACCTTA GGAATTATCT CAATTGGATT AGTTGTGACC
TATGTTTTAC AACAAATGAT GACTTTTGCA AGAGATTATC TCTTAACCAT ACTGAGTCAG
CGATTTACCA TTGACGTTAT CTTGTCCTAC ATACGACATA TCTTTGAACT CCCAATGTCT
TTTTTTGCCA CAAGACGTAC AGGGGAGGTT ATCTCACGTT TTAGTGATGC TAACTCTATT
ATCGATGCTC TGGCTTCGAC GATATTATCA CTTTTCCTTG ATTTCTCTAT TGTGATTATC
GTAGGAGGCG TGTTATTGAT ACAAAATAGC AATCTCTTCA AGCTAGTTCT TTGTTCGGTT
CCAATTTATA CCCTTATCGT CTTTGCCTTT ATGAAACCTT TTGAGCGAAT GAATCATGAC
GTCATGCAGA GTAATGCTAT GGTTAATTCA GCCATCATTG AGGACATTAA TGGGATTGAA
ACCATAAAGT CACTAACCAG CGAAGAAGTA TGCTATCAAA AGATTGATGG TGAGTTTATT
GACTATCTAG ACAATTCTTT TCGCCTTTCT AAGTTATCTA TACTACAAAC ATCATTGAAA
CAAGGTGCTC AACTTATTTT AAATGTACTT ATCCTCTGGA CAGGTGCTCA GTTGGTGATG
GGAAATACCA TTTCGATAGG ACAATTGATT ACTTTTAATA TGTTGCTTTC TTACTTCACG
AATCCTTTGG AAAATATCAT TAACCTGCAA ACCAAGTTAC AGTCTGCTAA GGTAGCTAAT
ACTAGGCTCA ATGAGGTCTA TCTGATTGAA TCAGAGTTTG GACAAAGTGA TGATACCTAT
CAAGAAGGCA TTGCGGATGG AGATATCACT GTTACGGATT TATCTTATAA ATATGGTTTT
GGTCGTGATA CTTTGACTGA TGTCAGTTTG ACGATTAGAC AAGGAGAAAA AATCAGTTTT
GTTGGTGTCA GTGGATCTGG TAAGACTACT CTAGCTAAAA TGTTGGTCAA TTTTTATCAA
CCATATAAGG GGCACATAGA TTTTAATGGT CAAAATATTA GTCGCATAGA CAAGAAAACT
CTTCGTCAAC ATATTAACTA TCTCCCTCAG CAATCCTATA TATTTAGTGG TAGTGTTTTA
GAAAATCTTA CTTTAGGTGC AGCACGGGGT ATTACGCAAG CTGATATTTT GAAAGCTTGT
GAAATAGCAG AAATTCGTCA AGATATTGAA AACATGCCTA TGGGGTTTCA GACAGAGCTG
TCTGATGGAG CAGGTCTGTC TGGAGGGCAA AAGCAACGTA TCGCTTTGGC GCGTGCACTA
CTAACGAAAT CTCCTGTACT AATCTTAGAT GAAGCAACTA GCGGATTGGA TGTTTTGACA
GAAAAGCAGG TTATTGATAA CCTCCTAGCA CTAAAAGATA AAACGATCAT CTTTGTAGCA
CACAGGCTTA GTATCGCTGA GCGGACCGAC CGTATCGTAG TCATTGATCA CGGACGCGTA
GTGGAGACAG GTTCTCATCA AGACCTAATG TCTTATCCAG GTTTCTATTA TCAATTATTT
AGAAAGTGA
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| Protein sequence | MKGFGMFRFR RTFVPQIDMR DCGVAALASV AKYYGSDYSL AHLRELAKTN KEGTTALGLV
EAAKKIGFET RAIKAEMSLF EMEDVPYPFI AHVNKDGKLQ HYYVIYKSTK DYLIIGDPDP
SVKVTKMTKE RFEKEWTGIT LFMGPEPSYK PHKDKKNGLW DFLPLIFKQR SLIANIVFAS
LLVTLINILG SYYLQGILDE YVPNQMKSTL GIISIGLVVT YVLQQMMTFA RDYLLTILSQ
RFTIDVILSY IRHIFELPMS FFATRRTGEV ISRFSDANSI IDALASTILS LFLDFSIVII
VGGVLLIQNS NLFKLVLCSV PIYTLIVFAF MKPFERMNHD VMQSNAMVNS AIIEDINGIE
TIKSLTSEEV CYQKIDGEFI DYLDNSFRLS KLSILQTSLK QGAQLILNVL ILWTGAQLVM
GNTISIGQLI TFNMLLSYFT NPLENIINLQ TKLQSAKVAN TRLNEVYLIE SEFGQSDDTY
QEGIADGDIT VTDLSYKYGF GRDTLTDVSL TIRQGEKISF VGVSGSGKTT LAKMLVNFYQ
PYKGHIDFNG QNISRIDKKT LRQHINYLPQ QSYIFSGSVL ENLTLGAARG ITQADILKAC
EIAEIRQDIE NMPMGFQTEL SDGAGLSGGQ KQRIALARAL LTKSPVLILD EATSGLDVLT
EKQVIDNLLA LKDKTIIFVA HRLSIAERTD RIVVIDHGRV VETGSHQDLM SYPGFYYQLF
RK
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