Gene LEUM_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLEUM_1920 
Symbol 
ID4423651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeuconostoc mesenteroides subsp. mesenteroides ATCC 8293 
KingdomBacteria 
Replicon accessionNC_008531 
Strand
Start bp1888625 
End bp1889896 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content40% 
IMG OID639675615 
Productmajor facilitator superfamily permease 
Protein accessionYP_819366 
Protein GI116618995 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000507154 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTA GTCAGTCCGA AAACGTAATG CAGCAAGATC AGGTAGAGAC TGGTGCTCAA 
ATGACCAGCG AACAAAAGGT GGTTCTTGGA TCAACAACCC TAGGGTTTAC TTTGGATCAT
ATGGACGCAA CATTCCTATC TTTCGCATTG GCGCCTATGA TTGCCGAACT ACACATTACT
GGTGCACAGG GTGGAATTAT TGCAGCAATG TCAAACTGGG GAGCACTATT AGGAAGTCTC
TTGTTTGGTA TTTTAGCTGA CCGTATCGGT CGTGTTAAAG TATTGTCTTA TACTATTATG
CTCGTGACCT TTGCGACAGT TATCTTGGCA TTTTTGGATA ACACGCACAC GATTTATGCA
GCTCGTTTCC TTCTGGGGAT GGGAACTGGT GGTGAGTATG GTGTAAGTAT GGCATTGATT
GCTGAGAGCT TTAGAGCTAG TCGTGTAGGC CGTATGAGCT CTATTACTGC AATTGGCGGA
CAAGTGGGTG CCATACTCGC GGCAATTTTA GCAACATTAA TTATGCCTTT CTTTGGTTGG
CGTGGTTTGT TTATGTTAGG ATTTTTGCCA CTAATCGTTG TATACATTGT GAGACGACAC
TTAAAAGAAA CACCTGAATT TGAGCAACTG CAGGCTGACT ACAAGACTGG TAAAAAGAAA
TTTAGTTTTA AAACGATTGC CAATACCCCC AAACGCGCTT ATACTTCTTT TGTGTTAATT
GTGATGTTGA CTATTCAAAC ATCGGGCTAT TACGGATTGA TGAACTGGTT GCCAACAATT
ATGCGGAAGC AATTGGGTAT CACAGAAACA ATTACAGCAG GATACGTCAA TCTTGGTATG
ATACCTATTA TTATTGGTAT GGCGGTTGGT ATGCTTACTT TTGGTACGAT TCTAGACACC
ATAGGTCCCC GACGCGCGTT TGCTATATTC TTAGTAGCTT CAGCGCTTAT GATTTATGTC
TTTACATTTG CATATAATAT GTGGACATTA ACAATTTTAG GTGCATTAGT TGGATTTTTC
TCTAACGGCA TGTATGGTGG ATTTGGCGCA GTTATTAGTC AATTGTATCC TTCGGAAATT
CGAGCAACTG CAGCCAATAC CTTGATGGGA TCTGGCCGTG CTATTGGTGC CTTTTCATCA
GTTGTGATTG GTTGGATTAT GGACAATTAT AGTGTGGCAG CCGTGATGCT GAGTTTATCG
TTAATGTACG TCATTAGTTT AATTTTTATG TTAACAATTC CTGGATTTAA AAAATTAAAT
ACTGACCAAT AA
 
Protein sequence
MTISQSENVM QQDQVETGAQ MTSEQKVVLG STTLGFTLDH MDATFLSFAL APMIAELHIT 
GAQGGIIAAM SNWGALLGSL LFGILADRIG RVKVLSYTIM LVTFATVILA FLDNTHTIYA
ARFLLGMGTG GEYGVSMALI AESFRASRVG RMSSITAIGG QVGAILAAIL ATLIMPFFGW
RGLFMLGFLP LIVVYIVRRH LKETPEFEQL QADYKTGKKK FSFKTIANTP KRAYTSFVLI
VMLTIQTSGY YGLMNWLPTI MRKQLGITET ITAGYVNLGM IPIIIGMAVG MLTFGTILDT
IGPRRAFAIF LVASALMIYV FTFAYNMWTL TILGALVGFF SNGMYGGFGA VISQLYPSEI
RATAANTLMG SGRAIGAFSS VVIGWIMDNY SVAAVMLSLS LMYVISLIFM LTIPGFKKLN
TDQ