Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LEUM_0084 |
Symbol | |
ID | 4421960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 |
Kingdom | Bacteria |
Replicon accession | NC_008531 |
Strand | - |
Start bp | 71588 |
End bp | 73735 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639673798 |
Product | bacteriocin-processing peptidase |
Protein accession | YP_817609 |
Protein GI | 116617238 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGT TTCATTATAT ATCACAACTT GAAGAAAAAG ATTGTGGCGT AGCAGCACTA GCTATGATTT TAAAGCGACA CGGCTCAGAT GTTTCATTAG CTAACATTCG TGAACGCTGT CAAACATCCC TATCGGGTAC AACGGCGCTA GGCTTAGTGA AGGCCGCTGA ATCATTCAAT ATGGATGTCC GTCCTATTCA AGCTGACCTT ACCTTATTTA ACATGAAAGA TTTGCCTCTG CCGTTCATCG CTCATGTTGA GAAAAAAGGT CAATATTTGC ATTATTATGT AGTGTACGGA TTCACTAAAA ACAAAGTTAT CATTGCAGAT CCAGATCCAA CAGTTGCTAA AACCGCAATG ACGTTACAAG AATTCTCTAA AGAGTGGACT GGTGTAGCAT TGTTCATGTC GCCTTCACCC AGATATAAAC CTTTTAAAGA AAATAAAAAC AGTATCCTAT CCTTTCTGCC AATTATTAGT CGACAAAAAG GATTAATTGC TAATATTGTC GTCGCTTCTT TGCTAGTCAC TTTAATTAGT ATCGCTGGCT CTTATTATAT GCAACTAGTG ATTGATACTT ATATTCCTAG TGCTATGTCT AACACATTAA CCGTTGTTTC ATTAGGACTC ATTGCCACCT ATGTGTTACA ACAGCTACTT AGTTTTGCTC GCACCTATCT GTTAACTATT ATGGGACAAC GATTATCGAT TGAAGTCATA CTATCATACA TACGGCACTT GTTCGAATTA CCTGTTAATT TCTTTGCCAC ACGTCGAACA GGTGAAATTG TCACGCGTTT TAATGACGCC AACACCATTA TTGATGCCAT GGCAAATACA ATTCTCTCAC TTTTTTTAGA TTTAGGTATC ACGATAATTG TTGGCAGCGT CTTAGCAATT CAAAATACAA AACTTTTTCT GCTATCTCTA ATCTCTTTTC CTATCTACTT CTTGATTGTC TATTGTTTCA TGAAGCCATT TGAACGATTG AATCAAGAAC AGATGGCAAG TAATGCAACG CTGAGCTCAT CTATTATTGA AGACATCAAT GGTATTGAAA CCATAAAATC TTTGACAAGC GAGAAGACGA GCTACCAAAA AATTGATCGT GAATTTATCG ATTATTTAAA AAAATCCTTT GCCCATCAAA AAAGCGAAGC CATTCAAAAT AGTATTAAAC AAGCAACTCA ACTCATTATC AATGTGCTCG TTTTATGGTT GGGTGCCAAG CTAGTGATTA GTAATCAAAT TAGTGTCGGT CAGTTAGTTA CCTATAATGC ATTACTAGGC TACTTTACTG AACCTTTCCA AAATATTATT AACTTGCAGG CGAAATTACA AACGGCAACG GTTGCTAACC GACGATTAAA CGAAGTCTAT CTTGTAAAAT CAGAGTTTAA AAAATCAGAA TCACAAGAGC TTCATCATAA CAACCCTCAT AACATTACAG TTGACGACGT CAGCTATCAA TATGGTTATC AAAAGAACAT ATTACACCAC TTTTCAATTA AGATCCCCTT TGGTGAAAAA ATTGCTCTGG TCGGTGTTAG CGGTTCCGGT AAGTCAACAT TAGCCAAACT ACTTGTTCAT TTTATATCTC CTAGTGCTGG CAACATTTTT ATTGGTGAAC AAAACATTAA ACACGTTCAA CGACAAAATT TAAGGCAACA TATTCTTTAT CTACCACAAA ACCCATACAT ATTTACTGGA AGCATATTAG ATAATTTAAC ACTAGGTGCT CGTGAAAACA CAACACAAGA AGACATCCTA CATGCTGTTG AGCTTGCTGA CATTAAAGAT GACATCGAAA ATATGCCACA AAGTTATCAA ACCGAAATTT CAGAGGAAGG CGGCATGTCT GGAGGCCAAA AGCAGCGTAT CGCTTTAGCT AGAGCCCTCC TTAGTAATTC TCAAATACTT ATTTTGGATG AATCAACCAG TAATCTTGAT GTCGCAACTG AAAAAAAGAT TATTGATAAT TTATTATCGC TTAAAAATAA AACAATCATT TTTATTGCAC ATCGCCTGAC TATTGCTGAA AAAGTCCAAC GCGTTATTCT GCTTGAAAAA GGGATCATCA GTGAAGATGG TAGCCATGCT GAACTTATAC ATAAAAAATC AAAATACTAT CATCTTGTAA AGCATTAA
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Protein sequence | MRKFHYISQL EEKDCGVAAL AMILKRHGSD VSLANIRERC QTSLSGTTAL GLVKAAESFN MDVRPIQADL TLFNMKDLPL PFIAHVEKKG QYLHYYVVYG FTKNKVIIAD PDPTVAKTAM TLQEFSKEWT GVALFMSPSP RYKPFKENKN SILSFLPIIS RQKGLIANIV VASLLVTLIS IAGSYYMQLV IDTYIPSAMS NTLTVVSLGL IATYVLQQLL SFARTYLLTI MGQRLSIEVI LSYIRHLFEL PVNFFATRRT GEIVTRFNDA NTIIDAMANT ILSLFLDLGI TIIVGSVLAI QNTKLFLLSL ISFPIYFLIV YCFMKPFERL NQEQMASNAT LSSSIIEDIN GIETIKSLTS EKTSYQKIDR EFIDYLKKSF AHQKSEAIQN SIKQATQLII NVLVLWLGAK LVISNQISVG QLVTYNALLG YFTEPFQNII NLQAKLQTAT VANRRLNEVY LVKSEFKKSE SQELHHNNPH NITVDDVSYQ YGYQKNILHH FSIKIPFGEK IALVGVSGSG KSTLAKLLVH FISPSAGNIF IGEQNIKHVQ RQNLRQHILY LPQNPYIFTG SILDNLTLGA RENTTQEDIL HAVELADIKD DIENMPQSYQ TEISEEGGMS GGQKQRIALA RALLSNSQIL ILDESTSNLD VATEKKIIDN LLSLKNKTII FIAHRLTIAE KVQRVILLEK GIISEDGSHA ELIHKKSKYY HLVKH
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