Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0966 |
Symbol | |
ID | 4439815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 968555 |
End bp | 969142 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639672817 |
Product | transcriptional regulator |
Protein accession | YP_814788 |
Protein GI | 116629616 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 98 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGTT GCATTTTGAA TAAATATCAT AAGAAAAGCA AAAAAACTGA TCAAATAATA GAATCTGCAC TATTAAAATT AATGGATTCA AGTGATTTAA ATAAAATTAC GATGAATGAA TTAGCTGACA TGGCAAATAT TAATCGTGTT ACTATTTATC GCCATTTCAA CGATAAATGG GCAATTATTG AGCAGATTGA AGCTAGGCTT TTTACGGCAT TAAAAAAACC ACATCAGAAA ATGCTCGATC AACTAGCATT AAAATCTGAT AATGGTATTG AATATCTAAC TAATTTTTTA CAGGTCTTCA AAGACAACTT AGTAACAATT CGTATTCTGA TTTCCAGTCA TGGTGACCTA AGTTTCTCAA CCAAGTTAAT GGACCATTTG TTAGAAATGG AAGGATTGTC ACATTCATTG ATGCATTTAC AAGCAAATAA TGACTTACAA GAACTATTTT CTTATTACAG CATTTCTGCA TTAATTGGAA TTATTCGTTT TTGGACTATC CACCCCAACT ATTCAGCCAA AGAAATGGCT ACTTTTTTCT TTAAAATGCG AAACGGAGAA TTAACAAAAC TAAGTTAA
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Protein sequence | MECCILNKYH KKSKKTDQII ESALLKLMDS SDLNKITMNE LADMANINRV TIYRHFNDKW AIIEQIEARL FTALKKPHQK MLDQLALKSD NGIEYLTNFL QVFKDNLVTI RILISSHGDL SFSTKLMDHL LEMEGLSHSL MHLQANNDLQ ELFSYYSISA LIGIIRFWTI HPNYSAKEMA TFFFKMRNGE LTKLS
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