Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0099 |
Symbol | |
ID | 4440506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 111243 |
End bp | 111905 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639671960 |
Product | alpha/beta fold family hydrolase |
Protein accession | YP_813949 |
Protein GI | 116628777 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00000675213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAGTAA AAGTTAATGG GGTTGAAATT TACTATCAGA AATTAGGTAA AGGACATCCC TTAATTTTGT TACATGGACA TCACCAAGAT GGTGGAATCT TCGATAAATT AGTTGCGCCG CTTTCTCTCT ATTACACAGT TGTGGTCCCC GATATGCGAG GCCATGGTTT AAGTGAAGGA GAAGCAAGCG AGCATTATCA AACTGAAGTT GAAGATTTAC GGGCTTTTAT TAGCGCGCTT AAACTTGAAA AGCCTTATAT CTTAGGCTTT GGTTCGGGAG GCTTAGTTGC TCTTTCTTTG GCCGCTCAAG CACCAGAATT AGTTTCTAAA ATAATTGTTG CTGGTACTTA CGTTAATGGA AACGGCGTGA ATGCAAAGCA CATTGCGGCT AATACCATTC GAGGCTTTTT TAAGGGAGAT CGTGACAGCA AAGTAGCTTT AAGAGAGAGT CATATTCCTG TTGAAACGTT AAAGCGAATT AAGACGCCGA CCTTATGTGT AGTAGGTGAA AAGGATTGGG TTAAAGTTGA ACATGTTCGT TGGTACAGTC AATTGCTTCC TAATTGTCGT TTAGTTTTAA TGCCTCGTCA GACGCATTAT AGTTATGTTG TTCATAGTTT AAAATTATTA GATTTAATTA AAGATTTTTG TAAAGAGAGC TAA
|
Protein sequence | MKVKVNGVEI YYQKLGKGHP LILLHGHHQD GGIFDKLVAP LSLYYTVVVP DMRGHGLSEG EASEHYQTEV EDLRAFISAL KLEKPYILGF GSGGLVALSL AAQAPELVSK IIVAGTYVNG NGVNAKHIAA NTIRGFFKGD RDSKVALRES HIPVETLKRI KTPTLCVVGE KDWVKVEHVR WYSQLLPNCR LVLMPRQTHY SYVVHSLKLL DLIKDFCKES
|
| |