| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_64590 |
|---|
| Symbol | |
|---|
| ID | 4384868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5753858 |
|---|
| End bp | 5755174 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639327817 |
|---|
| Product | putative MFS transporter |
|---|
| Protein accession | YP_793355 |
|---|
| Protein GI | 116053036 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0510632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGCC CGCTCGTCAC CTTTCCCGCG CTCTACACCG CCACCCTGCT CATGCTGGCC
GGCTCCGGCC TGTTCACCAC CTACATCGGC CTGCGCCTGA CCCAGGAAGG CGCAGGCGAC
CTGTGGGTCG GCGGGCTGAT GGCGTCCTAC TATTTCGGCC TGGTCTGCGG TGGAAAATTC
GGACACAAGC TGATCGCCAG CTTCGGCCAT ATCCGCTCCT ACGTGGCTTG CGCCGGGATT
GCCACCGTGA CCGTGCTGCT GCATGCCCTG GTCGATCAGC TGGAAGTCTG GCTGCTGCTG
CGCTTCATCA CCGGTGCGGT GATGATGAAC CAGTACATGG TGATCGAGAG CTGGCTCAAC
GAGCAGGCCG AGAGCCACCA GCGCGGCAAG GTGTTCGCCG GCTACATGGT CGCCGTCGAC
CTTGGCCTGG TGCTCGGCCA GGGCCTGCTG GCGCTGAGCC CGACCCTCGA CTACAAGCCG
TTGCTGCTGG TCGCCATCTG CTTCGCCTCG TGCCTGATCC CGCTGGCCAT GACCCGTCGC
GTGCACCCGG CCAAGCTGGT CGCCGCGCCG CTGGAAGTGC GTTTCTTCTG GCAACGCGTG
CCGCAGGCGC TGGGCACCAT CTTCATCGCC GGCCTGATGG TCGGCGCCTT CTACGGCCTG
GCGCCGGTCT ACGCCAACCG CAACGGCCTG GATGCCTCGC AATCGAGTTT CTTCGTCGGC
ATGTGCATCG TCGCCGGTTT CTGTGCGCAG TGGCCGCTGG GCTGGCTGTC CGACCGCCTC
GACCGCAGTT GGCTGATCCG CGGCAATGCG GTGCTGCTGT GCCTGGCCTC GATCCCGATG
TGGGGGCTGG TGACGCTGCC GTACTGGCTG CTGCTGGCCA ACGGGTTCGT TACCGGCATG
CTGCTGTTCA CCCTCTACCC GCTGGCGGTG GCGCTGGCCA ACGACCACGT CGAGCAGCCG
CGCCGGGTCG CGTTGTCGGC GATGCTGCTG ACCACCTACG GGGTCGGCGC CTGTATCGGC
CCGCTGGTGG CCGGCGCGCT GATGCGCCAC TTCGGTCCGG GGCTGTTCTA CATGCTGGTG
TCCGGCTACG CGGTGCTGCT GGTGTTCTGG GTGCAGCCCA AGCGCGTCAC CGGCGAACAC
CGGGTCGACG AGGCGCCGCT GCAACACGTG GCGATGCCGG ACACGGTCAG CCCGATGGCC
GCCACCCTCG ACCCGCGCGT CGAGGAAGTG CCGGAGGAGT TGGTGGTGGA GGCGCCGGCG
AATATCGGCC GCTCCGACGG TGAGCCGGAC GCCGGCGAGA AGCCCGCTCA GTCCTGA
|
|---|
| Protein sequence | MFSPLVTFPA LYTATLLMLA GSGLFTTYIG LRLTQEGAGD LWVGGLMASY YFGLVCGGKF
GHKLIASFGH IRSYVACAGI ATVTVLLHAL VDQLEVWLLL RFITGAVMMN QYMVIESWLN
EQAESHQRGK VFAGYMVAVD LGLVLGQGLL ALSPTLDYKP LLLVAICFAS CLIPLAMTRR
VHPAKLVAAP LEVRFFWQRV PQALGTIFIA GLMVGAFYGL APVYANRNGL DASQSSFFVG
MCIVAGFCAQ WPLGWLSDRL DRSWLIRGNA VLLCLASIPM WGLVTLPYWL LLANGFVTGM
LLFTLYPLAV ALANDHVEQP RRVALSAMLL TTYGVGACIG PLVAGALMRH FGPGLFYMLV
SGYAVLLVFW VQPKRVTGEH RVDEAPLQHV AMPDTVSPMA ATLDPRVEEV PEELVVEAPA
NIGRSDGEPD AGEKPAQS
|
|---|
| |