Gene PA14_58600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_58600 
Symbol 
ID4382636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5220484 
End bp5221299 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID639327308 
Producthypothetical protein 
Protein accessionYP_792861 
Protein GI116052546 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00829668 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC TGCTGCTCCG TCACGACGCA CTGGACGCCG AAGGTTTCGC CGCACAACTG 
GCCGGTACCC CGGGCGAGGT TGCCCAGGCC ATCCTCGGCG CTGCGCGCGA GGGCCTGACG
GAAGCCCAGG CCCTGCTCGG ACAGATCCTT CTGGACGGCC AAGGCATCCA GCGCGACCCG
CCCCTGGCGC GGACCTGGTT CGCGATCGCC GCCGGGCACG GCCACGCAAT GGCGCGCAAT
ATGCTCGCTC GCTGCCTGGA ACATGGCTGG GGCGGCCCGG CGGATCCAGC CGCGGCAGCG
GTCCACTATC GGATCGCCGC CCAGGCCGGC CTCGACTGGG CCCGCTACAA CCTGGCCAAT
CTTCACGCTA CCGGCCGCGG GGTGCCCCAG GACCAGCCGC GCGCCTATGC GCTGTATCGG
CAAGCGGCCG AGCAGGGCCA CGCGAAAGCG ATGAACCTGG TGGGGCGCTA CCACGAAGAA
GGCCTGGTGG TCGCTCGCGA CCTGGCGCAA GCTGCGCACT GGTATCGACG CTCCGCCGAG
GGTGGTGATT TTCGCGGCCA GTTCAGCCAC GCCGCGATGC TCAGCGCCTC GGGCCGCCAT
GCCGAAGCCG AAACCTGGCT CCGGCGTGCC CTCGAAGGCG GCAACCTGAA CTTCCTGCGC
AGCGCCCGCC ATGGCCTGGA GCAGTCGGCC CACCCACCGT TCCGCAGCCT GGCGCTGGCC
TACTACCGAC GCGCGGCGCA GTTGGGCGAC GACACCGATC GAGAGGCCCT GGAACAGGCG
CTCGAACGTC ACGGGCACGC ACGACTGCCC GCCTGA
 
Protein sequence
MRHLLLRHDA LDAEGFAAQL AGTPGEVAQA ILGAAREGLT EAQALLGQIL LDGQGIQRDP 
PLARTWFAIA AGHGHAMARN MLARCLEHGW GGPADPAAAA VHYRIAAQAG LDWARYNLAN
LHATGRGVPQ DQPRAYALYR QAAEQGHAKA MNLVGRYHEE GLVVARDLAQ AAHWYRRSAE
GGDFRGQFSH AAMLSASGRH AEAETWLRRA LEGGNLNFLR SARHGLEQSA HPPFRSLALA
YYRRAAQLGD DTDREALEQA LERHGHARLP A