Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_53920 |
Symbol | |
ID | 4381664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4781552 |
End bp | 4782274 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639326926 |
Product | transcriptional regulator |
Protein accession | YP_792485 |
Protein GI | 116048715 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.531171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGA ACCCGCCCCC TCTCGAAATT GCCCATGACG ACGGCGAGAC CTTGTCGGAA CACGTCTTCC GCAAGATCCA GAGCGCCATC GTCAGCGGCG AGATCGCGCC GGGCAGCAAG ATCTCCGAGC CGGAGCTGGC GCGCACCTAC GGCATCAGCC GCGGCCCGCT GCGCGAGGCG ATCCACCGCC TGGAAGGCCT GCGCCTGCTG GTGCGGGTGC CGCATGTCGG GGCGCGGGTG GTGTCGCTGA GCCACGCCGA GCTGATCGAA CTCTACGAGA TCCGCGAGTC CCTGGAAGGC ATGGCCTGCC GACTGGCCGC CGAGCGCATG AGCCAGGCCG AGATCGACGA ACTGCGCCGG GTGCTCGACA CCCACGAGCG CGACGAGGCG TTCCAGGCCG GGCGCGGCTA TTACCAGCAG GAAGGCGACT ACGACTTCCA CTACCGGATC ATCCAGGGCA GCGGCAACGC CACCCTCACC CGCATGCTCT GCGGCGAGCT CTACCAACTG GTGCGGATGT ACCGCATCCA GTACTCGACC ACACCGAACC GGCCGCGCCA GGCCTTCGCC GAACACCACC GCATTCTCGA CGCCATCGCC GACCGTGACG GCGAACTGGC CGAGCTGCTG ATGCGCCGCC ACATCAGTGC GTCGCGCCGC AATATCGAGC GCCAGCTGGA ACCCCAGCCG GCGAAGCTCG CCTCCGCTTC CTCCACCGTC TAA
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Protein sequence | MTQNPPPLEI AHDDGETLSE HVFRKIQSAI VSGEIAPGSK ISEPELARTY GISRGPLREA IHRLEGLRLL VRVPHVGARV VSLSHAELIE LYEIRESLEG MACRLAAERM SQAEIDELRR VLDTHERDEA FQAGRGYYQQ EGDYDFHYRI IQGSGNATLT RMLCGELYQL VRMYRIQYST TPNRPRQAFA EHHRILDAIA DRDGELAELL MRRHISASRR NIERQLEPQP AKLASASSTV
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