| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_53780 |
|---|
| Symbol | |
|---|
| ID | 4382804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4767825 |
|---|
| End bp | 4769072 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639326912 |
|---|
| Product | MFS family transporter |
|---|
| Protein accession | YP_792471 |
|---|
| Protein GI | 116048729 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.033353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.109422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCG CCCTCGCCGC GAACCCGACC CAGCGCTACC GCTGGGTCAT CCTGCTGATC
GCCACCTTCG CCCAGGCCTG CGCCTGCTTC TTCGTCCAGG GCATCGGCGC GATCGCCGTG
TTCATCCAGA ACGACCTGCA ACTCTCGTCG CTGCAGATCG GCCTGCTGGT GTCGGCGGCG
CAGCTGGTGC CGATCGTCGG CCTGCTGGTG GCCGGCGAGC TGCTCGACCG CTACTCCGAA
CGGCTGGTGG TCGGCCTCGG CACGCTGATC GTCGCGCTGG CCCTCTGCGC CTCGCTGTGG
GCCACCGACT ACCTGACCAT CCTGCTGTTC CTGGTGGTCG TCGGCGCCGG CTACAGCACG
GCGCAGCCGG GCGGCAGCAA GTCGGTGTCG CGCTGGTTCG CCAAGACCCA GCTGGGCTTC
GCCATGGGCA TCCGCCAGGC CGGGCTGCCG CTGGGCGGCG CGCTGTCCGC CGCGCTGCTG
CCGTACCTGG CGGGGATCTA CGGCTGGCGC AGCGCATTCC TCGCCGGCGG CCTGGTTGCG
TTCCTCGGCG CGCTGGCCTT CATGCTCTTC TACCGCACCC CGCCGGACGC CCCCGCGCCC
GGCGCGAACC CCGCCGAACG CGACCTGGGC GCGGTGGTGA AGTCGCGGCT GGCGATGATC
ACCGACCCGG CGATGAAGAA CATCGTCTGT TCCGGGGTGG CGCTGATCTC GGTGCAGTAC
GGCATCCTGG TGTTCACCGT ACTCTACCTG CACGAGACCC TGGAGATCGG CATCGGCATG
GCCGCGACCC TGCTGTTCGT CGCCCAGGGC AGCGGCGTCG CCGGGCGCAT CCTGCTGGCC
GCCTGGAGCG ACCGCTGCCG CGCCGGGCGC TACTTCCCGG TGATGGTCTG CCTCGGCGCG
GTGATCCTCG GCCTGCTGGC GCTGGTCCTG CTGCCCCTGC AATCACCGTT GGGGATGGGC
CTGGTAGTGG CCTGGCTGGG CTTCTTCGGC TTCGGCTGGT ACGGTCCCTG GGTGGCCTAT
GTGGCGGATA CCGCGCCGGT CGGCAAGACC GGCTTCGCCC TCGGCCTGGC GATGGCCATC
AACCAGCTGG CGATCGTTCT CGCGCCGCCG GCGCTGGGGC TGCTCAAGGA CTTCAGCCAC
AGCTTCGTCC CCGGCTGGCT GGCACTCTGC CTGATGGCGG CGGTAGCCCT TGTGGTCACT
GCCTGGAGCG GCCGCGGCCT GCCCACGGCG CTGCCACAGA AGCACTGA
|
|---|
| Protein sequence | MTAALAANPT QRYRWVILLI ATFAQACACF FVQGIGAIAV FIQNDLQLSS LQIGLLVSAA
QLVPIVGLLV AGELLDRYSE RLVVGLGTLI VALALCASLW ATDYLTILLF LVVVGAGYST
AQPGGSKSVS RWFAKTQLGF AMGIRQAGLP LGGALSAALL PYLAGIYGWR SAFLAGGLVA
FLGALAFMLF YRTPPDAPAP GANPAERDLG AVVKSRLAMI TDPAMKNIVC SGVALISVQY
GILVFTVLYL HETLEIGIGM AATLLFVAQG SGVAGRILLA AWSDRCRAGR YFPVMVCLGA
VILGLLALVL LPLQSPLGMG LVVAWLGFFG FGWYGPWVAY VADTAPVGKT GFALGLAMAI
NQLAIVLAPP ALGLLKDFSH SFVPGWLALC LMAAVALVVT AWSGRGLPTA LPQKH
|
|---|
| |