| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48090 |
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| Symbol | aprF |
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| ID | 4385541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4279323 |
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| End bp | 4280768 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639326432 |
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| Product | alkaline protease secretion outer membrane protein AprF precursor |
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| Protein accession | YP_791997 |
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| Protein GI | 116049200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0152412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC GCCGCCTGAT GACCTGGCTG TTCGGCGCCT TCCTGTTGCT GCTGCGCGAG
GATGCCTTCG CCCTCGGCCT GCTGGACGGC TATCACCTGG CCCTGGAGAA CGACCCGCAG
TTCCAGGCCG CGATCCAGGA GCACGAGGCC GGCAGGCAAT ACCGTGCGCT CGGCCGCGCG
GCGCTGCTGC CGCGCCTGGT GTACAGCTAC AACCGTGGGC GCAGTTGGTC CGATGTGACC
CAGACCACCA CCCGCGGCGA TTTCAAGGAA GACCGCGACT ACGACAGCTA CGTCTCCACC
CTCAGCCTGC AACAGCCGTT GTTCGACTAC GAGGCCTTCA GCCGCTACCG CAAGGGCGTG
GCCCAGGCGC TGCTGTCCGA CGAGCGCTTC CGCAGCCAGA GCCAGGAACT GCTGGTCCGG
GTCCTGGAAG CCTATACCGG CGCGCTGCTG GCCCAGGACC AGATCGAACT GGCGCGGGCG
CAGAAACGCT CCTACCGCGA GCAGTTCCAG CTCAACCAGC GCCAGTTCGA GCGCGGCAAC
GGCACCCGCA CCGACACCCT GGAGACCCAG GCCCGCTTCA ACCTGGCCCA GGCCCAGGAA
ATCGAGGCGC GGGACAGCCA GGATGCCGCC CTGCGCGAGC TGGAGCGACT GGTCGGGGCG
CCGCTGGAGA TCGCCGACCT GGCGCCGCTC GGCGAACGCT TCCAGGTGCG CCCGCTGAGC
CCCGCCAGCT ACACCGCCTG GCGCGACCTG GCGCTGGCCG AGAATCCCGA GCTGGCCTCG
CTGCGCCACG CGGTGGACGT GGCCCGCTAC GAGGTCGAGC AGAACCGCGC CGACTTCCTG
CCGCGCCTGG GCCTGTACGC CAGCACCGGC AAGTCCAAGT CCGGTTCGGA GAACACCTAC
AACCAGCGCT ACGAGACCGA CAGCGTCGGC ATCCAGTTGA GCGTTCCGCT GTTCTCCGGC
GGCGAGACCC TGGCGGCGAC GCGCCAGGCC ACGCATCGCA TGGAGAAGAG CCATTACGAC
CTGGACGACA AGGTCCGCGA GACCCTCAAC CAGGTGCGCA AGATGTACAA CCAGAGCAGC
AGCAGCGCGG CGAAGATCCG CGCCTACGAG ATGACCGTGG ATTCGGCGCG GACGTTGGTG
ATGGCCACGC GCAAGAGCAT CGCCGCCGGG GTGCGGGTCA ACCTCGACCT GCTGAACGCC
GAGCAGGCGC TGTACAGCGC GATGAACGAG CTGTCCAAGG CCAAGTACGA CTACCTCACG
GCCTGGGCAC GCCTGCGTTT CTACGCCGGG GTGCTGGACG AGGCCGACCT GGAACTGGTG
GCGGCGAACT TCGTTTCCGG CGAGACGCCG GCGCGCCGCC GCGACTGCGC GACGACGGAT
TGCCCGGCGC CGCTGCACAC CCTGTCGAAG ACCGATACGG AGGAAAACCG GAGCGCGCTC
AATTGA
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| Protein sequence | MTMRRLMTWL FGAFLLLLRE DAFALGLLDG YHLALENDPQ FQAAIQEHEA GRQYRALGRA
ALLPRLVYSY NRGRSWSDVT QTTTRGDFKE DRDYDSYVST LSLQQPLFDY EAFSRYRKGV
AQALLSDERF RSQSQELLVR VLEAYTGALL AQDQIELARA QKRSYREQFQ LNQRQFERGN
GTRTDTLETQ ARFNLAQAQE IEARDSQDAA LRELERLVGA PLEIADLAPL GERFQVRPLS
PASYTAWRDL ALAENPELAS LRHAVDVARY EVEQNRADFL PRLGLYASTG KSKSGSENTY
NQRYETDSVG IQLSVPLFSG GETLAATRQA THRMEKSHYD LDDKVRETLN QVRKMYNQSS
SSAAKIRAYE MTVDSARTLV MATRKSIAAG VRVNLDLLNA EQALYSAMNE LSKAKYDYLT
AWARLRFYAG VLDEADLELV AANFVSGETP ARRRDCATTD CPAPLHTLSK TDTEENRSAL
N
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