| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_33960 |
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| Symbol | |
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| ID | 4380435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3017584 |
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| End bp | 3019590 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639325300 |
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| Product | hypothetical protein |
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| Protein accession | YP_790869 |
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| Protein GI | 116050314 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000148732 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.101757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTC CCACCGATAG CAATACCAGC CTCTCCCTGA CCGCCTCGGC GCTGGCAGCC
CTGTTCCCGG AGCGTCTGGC CGGGGAAGAA CGCCTGAACG CACTGCCCGG TTGGGAACTG
CTGGGCTACA GCGCCAGCCC CTTAGCCCTG GACGGCGCAA TCGCCACCCA TCTCACCGCC
ACCCTGCACA ACGACGCCGA CCAGCGTCCG CTCGACGGCC TGGTCGCGGA GATCCGCCAA
CTCCCCGGCG ATGCCAGCGC CGAGCGCTAC CAGGTGCTGT TGCGCCCCTG GCTCTGGTGG
CTGACGCTGG CCAGCAACAA CCGGGTGTTC CAGAACCTGG CCACCAGCGA CATCGTCACC
CAGGTCTTCG ACCAGCACGG CTTCAGCGAC TACCAGTTGC AGCTCAGCGG CAGCTACCAG
CCCCGCGAAT ACTGCGTGCA GTACGGCGAG AGCGACCTTG CCTTCGTCTC GCGGCTGCTG
GAGGAAGACG GCATTTTCTG GTTCTTCACC CATGCCGCCG GCAAGCACAC CCTGGTGCTG
GCCGACAGCA ACGACGCCTT CCCGCCGATT CCCAACGGCC CGCAAGTGGC CTACCTGGGC
CAAGGAATCG GCGTGCGCGA GTTGCAGGGC GTGCGTTCGG CGCAGTACAG CCTCCAGGCG
GTATCCGGGA CCTACAGCGC CACCGACTAC GAGTTCACCA CCCCGAGCAC CTCGCTGTAC
TCCCAGGCCG AGGCGGTCTC CGGCGCCGCC GGCGTCTACC AGCACCCCGG CGGCTACACC
GCCAAGGCCC AGGGCGACAG CCTGACCAAG CAACGCATCG ACGGCCTGCG CAGCCAGGAG
ACGCGCCTGA TCGGCGAGAG CGACTGCCGC TGGCTGGTGC CCGGCCACTG GTTCACCCTC
AGCGGGCATG ACGACGATTC GCTGAATATC GACTGGGTGC TGACCTCGGT CACCCATGAC
GCCAGTCACG CGCACTACCG CAACCGCTTC GAGGCGATCC CCAAGGCCAC CGCCTACCGC
CCCGCGCGGG TCACGCCCAA GCCACGCATG CACACCCAGA CCGCCCTGGT GGTGGGCAAG
GCCGGCGAGG AGATCTGGAC CGACCAGTAC GGCCGGATCA AGATCCAGTT CCCCTGGGAC
CGCGACGGCA AGAACGACGA GACCTCCTCC TGCTGGGTGC GCGTGGTGCT GCCCTGGAGC
GGCAAGGGCT TCGGCATGCA GTTCGTGCCG CGCATCGGCC AGGAAGTGAT CGTCACCTTC
ATCGACGGCG ACCCGGACCG CCCGCTGGTC ACCGGCTGCG TCTACAACGG CGACAACGCC
CTGCCCTACG CGCTGCCGGA CAACCAGACG CAGTCCGGGA TCAAGACCAA CTCGTCGAAG
GGCGGCGGCG GTTTCAACGA GCTGCGCTTC GAGGACAAGA AGGACGCCGA GGAAGTCTTC
CTCCAGGCGC AGAAGGACCT CAACGTCAAC GTGCTCAACG ACAGCACCGC CAGCATCGGC
CACGACGAGA CCCTGACGGT GCAGAACGCC CGCACCCGCA CGGTGAAGGA AGGCGACGAG
ACCGTCACCC TGGAGAAAGG CAAGCGCAGC GTGACCATCC AGACCGGCAG CGACAGTCTG
GATGTGAAGG ACACGCGCAC GGTGACGGTG GGCGCCGACC AGACCCACAG CACCGGCGGC
AACTACAGCC ACAAGGTCAG CGGCGACTTC GAGCTGACGG TGGACGGCAA CCTGACCATC
AAGGTCAGCG GCACCCTCGC CCTGCAGAGC GGCGGCAGCC TGACCCTGAA GAGCGACGCC
GACCTCGCCG CCCAGGCCGG CACCTCGCTG ACCAGCAAGG CCGGGACGTC GCTGACCAAC
CAGGCCGGCA CCTCCCTCAC CAACAAGGCC GGCACCAGCC TGACCAACGA TGCCGGCGTC
AGCCTGACCA ACAAGGCCGG CGCCGAACAG ACGGTGGACG GCGGCGGCAT GCTGACCATC
AAGGGCGGTC TGGTAAAGGT CAACTGA
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| Protein sequence | MPRPTDSNTS LSLTASALAA LFPERLAGEE RLNALPGWEL LGYSASPLAL DGAIATHLTA
TLHNDADQRP LDGLVAEIRQ LPGDASAERY QVLLRPWLWW LTLASNNRVF QNLATSDIVT
QVFDQHGFSD YQLQLSGSYQ PREYCVQYGE SDLAFVSRLL EEDGIFWFFT HAAGKHTLVL
ADSNDAFPPI PNGPQVAYLG QGIGVRELQG VRSAQYSLQA VSGTYSATDY EFTTPSTSLY
SQAEAVSGAA GVYQHPGGYT AKAQGDSLTK QRIDGLRSQE TRLIGESDCR WLVPGHWFTL
SGHDDDSLNI DWVLTSVTHD ASHAHYRNRF EAIPKATAYR PARVTPKPRM HTQTALVVGK
AGEEIWTDQY GRIKIQFPWD RDGKNDETSS CWVRVVLPWS GKGFGMQFVP RIGQEVIVTF
IDGDPDRPLV TGCVYNGDNA LPYALPDNQT QSGIKTNSSK GGGGFNELRF EDKKDAEEVF
LQAQKDLNVN VLNDSTASIG HDETLTVQNA RTRTVKEGDE TVTLEKGKRS VTIQTGSDSL
DVKDTRTVTV GADQTHSTGG NYSHKVSGDF ELTVDGNLTI KVSGTLALQS GGSLTLKSDA
DLAAQAGTSL TSKAGTSLTN QAGTSLTNKA GTSLTNDAGV SLTNKAGAEQ TVDGGGMLTI
KGGLVKVN
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