Gene PA14_30590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30590 
Symbol 
ID4380621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2648473 
End bp2651127 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content67% 
IMG OID639325033 
Productputative outer membrane receptor protein 
Protein accessionYP_790604 
Protein GI116050577 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.507511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATG TACGTCTTTC CTCTCGTTCG TTGACCCCCG TGCTCTGTGC GGTGGGGCTC 
GCCTGCGCGC TGCAGGGCGA GGTGCAGGCC GCCGACGGTG GGCCGCGCGA CGCGGCCACG
GCGCCCCGGG TATTCGACAT AGCGCCCGGC GAACTGGCCG AGGTGTTGTT GAACATCGTG
CGCCAGGGAC ACGTGCCGAT CGCCTTCGAC CAGCGCCTGG TGGCGGGGTT GCGCGGACCG
GATATCCGCG GCCGGCTCAG TGTCGAGGAC GCCTTGCGGC GTGCCCTGGC CGGCAGCGGG
CTGGCATACG CGCAGGACGA AAGCGGTGCC TTCGTCCTGC GCGGCGGACA GGCGCCTGTG
CAGGAGACGC GAGGTGCGGC GGCGGCACCG ACCTTGTCCA CCGTGGTGGT CACCGGCACG
CGCAAGAGCG ATGTGAAGGC GCAGGACAGC CTGAGCCCGA TCGATGTGGT CAGCGCTACC
CAGCTACGCA GCAGCGGCGC GGTCGACCTG CGCGATGCAC TGGTCAAACT GCTGCCCTCG
CTGACCCGCC AGGCCCAGCC GTTCAACGCC TCGGCGTTGA CCCACACGCA GTCGCTGCGC
GGGCTGAGCC CCAACCATGT GCTGGTGCTG GTGAACGGCA AGCGTCGCCA CGAAACGGCC
AATCTCAATA TCAGCGGGGG GCTGGAGAAG GGCTCCACCG GCGTCGATCT GGACACCATC
CCGATCAACG CCATCGAGCG GGTCGAGGTG CTGCGCGACG GTGCTTCGGC ACAGTATGGT
TCGGACGCCA TCGCCGGGGT GATCAACGTC ATCCTCAAGT CCGCCGACCA CGGCGGGTCG
GCGGCCGCTG ACGTCGGGCA GACCGGCGAC GGCGACGGCT TCACCCATGG CGGCGGGGGG
AACATCGGAC TGGCCTTCGG CGATAGCGGC TTCGTCAACC TCACCGCCGA ATATCGCGAG
CAGGAGCGCA CGATGCGCAG CGGCATCGAT GAGCGCACCG GTCGGCGCGA CAACATTTCC
ATGGGCGATC CCGCGTTCCA CCGGCAATCG TTGGCGCTCA ACTCCGGTTT CGGGTTGGGC
GACGATATCG AGGTGTACGG CTTCGGCACC TATACTCGGC GCAAGGCCTC CTCGGCGGCC
AACTATCGCC TGGCTTCGGT GGCGCCGACG CTGTATCCGG ACGGCTTCAC GCCGCGCCCG
AACAGCGACG AGGACGACTA TGCGTTCCTC GCCGGGGTGC GCGGCGAGCG TCTGCTGGAT
GCCTGGCACT GGGACCTGAG CAGTGGCTAC GGCGCCGACC GTCCCGATAT CGGCATGACC
CAGTCGGTGA ACGCGGCGAT CTACCGTGAA ACCGGCAACA GCCCGAGAAG CTTCGACCTG
GCGCACTACC GCAACAGCCA ATGGACCAGC AACCTGGACC TGGGGCGGGA ATTCCAACTG
GATTTCCTCG CCGCCCCGCT GGCGCTGTCG CTGGGCGCGG AATACCGGCG GGAAACCTAC
CGCATCGACG CCGGCGACCC GGCGTCCTAC TACAGCGGCG GGGCGGAATC CCTGGCTGGC
CTCTCGCCGC TCAGCGAGGG GCAATGGTCG CGGCACGCCT GGGCGTCCTA CCTGGACCTG
GGTACCTCCC TGACCCCAGC CTGGGAGGTT GACGTGGCGG TGCGCCACGA GAAATTCAGC
GACTTCGGCA GCACCACCAA CGGCAAGTTC GCCACCCGTT ACCAGTTCGA TCCGCGGGTG
GCGCTGCGCG CCAGCGTAAG CAGCGGGTTC CGCGCGCCGT CCCTGGTCCA GGAGCACTAC
ACCGGCCTCA GCGTCGGCCC GACCATCGCC CTCGGCCTGC TGGCGGCCAA CTCGCCGGCA
GCGAAGATGC TCGGCGCCGA CGAACTGCAA CCGGAGAAGT CGACCAGCTT CAACCTTGGC
CTGGTACTCA ACCCTTGGGA AAACGTCGGG CTGAACATCG ACGCCTACCA GATCAGCATC
CGCGACCGCA TCGTCGACAG CGCCACCTAT TCCGGCCAGG AAGCCATCGA TGCCCTGGCC
GCGGCGGGGA TCTCGTTGCC GGCCAGTGCC AGTACGGTCA GTACCCATTA CCTGGCCAAC
GGTGCCGACA CCCGCACCCG CGGTGTCGAC ATCACCGGTC ACTACCTCGT CGCGCTTGGC
GAGTACGGGC AGGTCGACTG GGAACTGTCG GCCAACTTCA ACCGCACCAC CTTGCGCAAG
AACCATCGAG GCGCCAACGG CGAGCCGCTG CTCAATGCCC AGCAGGTCGC CTGGATCACC
AGCTCCACCC CGCGCAGCCA GGTTTCCCTC GGCGGCACCT GGAGCCGCCA GGACTGGGAG
GTCAGCCTGC GCCTGACGCG CTACGGTCGG ACCAGCTCGG AACTCGACTA CACGGTAGGG
CCGGACGCCT GGTCGACGGA GAAATTCAAC CATTTCGTCA ACGACCCGAA GTACATCACC
GACATCGCCG CGCGCTACCG GCTCAGCGCC GACCTGACGC TGACCGCCGG CGCCGACAAC
CTGTTCGACG TCCGTCCGGA CAAGCTGCCC GCGCAGAACA CCACCTATGG CGACGTGCTG
CGCTACGACA CCTATGCCTC GCAGATCGGC TTCAACGGCG CCTTCTACTA CCTGCGCGCG
GCCTACCGCT TCTAG
 
Protein sequence
MPDVRLSSRS LTPVLCAVGL ACALQGEVQA ADGGPRDAAT APRVFDIAPG ELAEVLLNIV 
RQGHVPIAFD QRLVAGLRGP DIRGRLSVED ALRRALAGSG LAYAQDESGA FVLRGGQAPV
QETRGAAAAP TLSTVVVTGT RKSDVKAQDS LSPIDVVSAT QLRSSGAVDL RDALVKLLPS
LTRQAQPFNA SALTHTQSLR GLSPNHVLVL VNGKRRHETA NLNISGGLEK GSTGVDLDTI
PINAIERVEV LRDGASAQYG SDAIAGVINV ILKSADHGGS AAADVGQTGD GDGFTHGGGG
NIGLAFGDSG FVNLTAEYRE QERTMRSGID ERTGRRDNIS MGDPAFHRQS LALNSGFGLG
DDIEVYGFGT YTRRKASSAA NYRLASVAPT LYPDGFTPRP NSDEDDYAFL AGVRGERLLD
AWHWDLSSGY GADRPDIGMT QSVNAAIYRE TGNSPRSFDL AHYRNSQWTS NLDLGREFQL
DFLAAPLALS LGAEYRRETY RIDAGDPASY YSGGAESLAG LSPLSEGQWS RHAWASYLDL
GTSLTPAWEV DVAVRHEKFS DFGSTTNGKF ATRYQFDPRV ALRASVSSGF RAPSLVQEHY
TGLSVGPTIA LGLLAANSPA AKMLGADELQ PEKSTSFNLG LVLNPWENVG LNIDAYQISI
RDRIVDSATY SGQEAIDALA AAGISLPASA STVSTHYLAN GADTRTRGVD ITGHYLVALG
EYGQVDWELS ANFNRTTLRK NHRGANGEPL LNAQQVAWIT SSTPRSQVSL GGTWSRQDWE
VSLRLTRYGR TSSELDYTVG PDAWSTEKFN HFVNDPKYIT DIAARYRLSA DLTLTAGADN
LFDVRPDKLP AQNTTYGDVL RYDTYASQIG FNGAFYYLRA AYRF