Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_30590 |
Symbol | |
ID | 4380621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2648473 |
End bp | 2651127 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639325033 |
Product | putative outer membrane receptor protein |
Protein accession | YP_790604 |
Protein GI | 116050577 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.507511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGATG TACGTCTTTC CTCTCGTTCG TTGACCCCCG TGCTCTGTGC GGTGGGGCTC GCCTGCGCGC TGCAGGGCGA GGTGCAGGCC GCCGACGGTG GGCCGCGCGA CGCGGCCACG GCGCCCCGGG TATTCGACAT AGCGCCCGGC GAACTGGCCG AGGTGTTGTT GAACATCGTG CGCCAGGGAC ACGTGCCGAT CGCCTTCGAC CAGCGCCTGG TGGCGGGGTT GCGCGGACCG GATATCCGCG GCCGGCTCAG TGTCGAGGAC GCCTTGCGGC GTGCCCTGGC CGGCAGCGGG CTGGCATACG CGCAGGACGA AAGCGGTGCC TTCGTCCTGC GCGGCGGACA GGCGCCTGTG CAGGAGACGC GAGGTGCGGC GGCGGCACCG ACCTTGTCCA CCGTGGTGGT CACCGGCACG CGCAAGAGCG ATGTGAAGGC GCAGGACAGC CTGAGCCCGA TCGATGTGGT CAGCGCTACC CAGCTACGCA GCAGCGGCGC GGTCGACCTG CGCGATGCAC TGGTCAAACT GCTGCCCTCG CTGACCCGCC AGGCCCAGCC GTTCAACGCC TCGGCGTTGA CCCACACGCA GTCGCTGCGC GGGCTGAGCC CCAACCATGT GCTGGTGCTG GTGAACGGCA AGCGTCGCCA CGAAACGGCC AATCTCAATA TCAGCGGGGG GCTGGAGAAG GGCTCCACCG GCGTCGATCT GGACACCATC CCGATCAACG CCATCGAGCG GGTCGAGGTG CTGCGCGACG GTGCTTCGGC ACAGTATGGT TCGGACGCCA TCGCCGGGGT GATCAACGTC ATCCTCAAGT CCGCCGACCA CGGCGGGTCG GCGGCCGCTG ACGTCGGGCA GACCGGCGAC GGCGACGGCT TCACCCATGG CGGCGGGGGG AACATCGGAC TGGCCTTCGG CGATAGCGGC TTCGTCAACC TCACCGCCGA ATATCGCGAG CAGGAGCGCA CGATGCGCAG CGGCATCGAT GAGCGCACCG GTCGGCGCGA CAACATTTCC ATGGGCGATC CCGCGTTCCA CCGGCAATCG TTGGCGCTCA ACTCCGGTTT CGGGTTGGGC GACGATATCG AGGTGTACGG CTTCGGCACC TATACTCGGC GCAAGGCCTC CTCGGCGGCC AACTATCGCC TGGCTTCGGT GGCGCCGACG CTGTATCCGG ACGGCTTCAC GCCGCGCCCG AACAGCGACG AGGACGACTA TGCGTTCCTC GCCGGGGTGC GCGGCGAGCG TCTGCTGGAT GCCTGGCACT GGGACCTGAG CAGTGGCTAC GGCGCCGACC GTCCCGATAT CGGCATGACC CAGTCGGTGA ACGCGGCGAT CTACCGTGAA ACCGGCAACA GCCCGAGAAG CTTCGACCTG GCGCACTACC GCAACAGCCA ATGGACCAGC AACCTGGACC TGGGGCGGGA ATTCCAACTG GATTTCCTCG CCGCCCCGCT GGCGCTGTCG CTGGGCGCGG AATACCGGCG GGAAACCTAC CGCATCGACG CCGGCGACCC GGCGTCCTAC TACAGCGGCG GGGCGGAATC CCTGGCTGGC CTCTCGCCGC TCAGCGAGGG GCAATGGTCG CGGCACGCCT GGGCGTCCTA CCTGGACCTG GGTACCTCCC TGACCCCAGC CTGGGAGGTT GACGTGGCGG TGCGCCACGA GAAATTCAGC GACTTCGGCA GCACCACCAA CGGCAAGTTC GCCACCCGTT ACCAGTTCGA TCCGCGGGTG GCGCTGCGCG CCAGCGTAAG CAGCGGGTTC CGCGCGCCGT CCCTGGTCCA GGAGCACTAC ACCGGCCTCA GCGTCGGCCC GACCATCGCC CTCGGCCTGC TGGCGGCCAA CTCGCCGGCA GCGAAGATGC TCGGCGCCGA CGAACTGCAA CCGGAGAAGT CGACCAGCTT CAACCTTGGC CTGGTACTCA ACCCTTGGGA AAACGTCGGG CTGAACATCG ACGCCTACCA GATCAGCATC CGCGACCGCA TCGTCGACAG CGCCACCTAT TCCGGCCAGG AAGCCATCGA TGCCCTGGCC GCGGCGGGGA TCTCGTTGCC GGCCAGTGCC AGTACGGTCA GTACCCATTA CCTGGCCAAC GGTGCCGACA CCCGCACCCG CGGTGTCGAC ATCACCGGTC ACTACCTCGT CGCGCTTGGC GAGTACGGGC AGGTCGACTG GGAACTGTCG GCCAACTTCA ACCGCACCAC CTTGCGCAAG AACCATCGAG GCGCCAACGG CGAGCCGCTG CTCAATGCCC AGCAGGTCGC CTGGATCACC AGCTCCACCC CGCGCAGCCA GGTTTCCCTC GGCGGCACCT GGAGCCGCCA GGACTGGGAG GTCAGCCTGC GCCTGACGCG CTACGGTCGG ACCAGCTCGG AACTCGACTA CACGGTAGGG CCGGACGCCT GGTCGACGGA GAAATTCAAC CATTTCGTCA ACGACCCGAA GTACATCACC GACATCGCCG CGCGCTACCG GCTCAGCGCC GACCTGACGC TGACCGCCGG CGCCGACAAC CTGTTCGACG TCCGTCCGGA CAAGCTGCCC GCGCAGAACA CCACCTATGG CGACGTGCTG CGCTACGACA CCTATGCCTC GCAGATCGGC TTCAACGGCG CCTTCTACTA CCTGCGCGCG GCCTACCGCT TCTAG
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Protein sequence | MPDVRLSSRS LTPVLCAVGL ACALQGEVQA ADGGPRDAAT APRVFDIAPG ELAEVLLNIV RQGHVPIAFD QRLVAGLRGP DIRGRLSVED ALRRALAGSG LAYAQDESGA FVLRGGQAPV QETRGAAAAP TLSTVVVTGT RKSDVKAQDS LSPIDVVSAT QLRSSGAVDL RDALVKLLPS LTRQAQPFNA SALTHTQSLR GLSPNHVLVL VNGKRRHETA NLNISGGLEK GSTGVDLDTI PINAIERVEV LRDGASAQYG SDAIAGVINV ILKSADHGGS AAADVGQTGD GDGFTHGGGG NIGLAFGDSG FVNLTAEYRE QERTMRSGID ERTGRRDNIS MGDPAFHRQS LALNSGFGLG DDIEVYGFGT YTRRKASSAA NYRLASVAPT LYPDGFTPRP NSDEDDYAFL AGVRGERLLD AWHWDLSSGY GADRPDIGMT QSVNAAIYRE TGNSPRSFDL AHYRNSQWTS NLDLGREFQL DFLAAPLALS LGAEYRRETY RIDAGDPASY YSGGAESLAG LSPLSEGQWS RHAWASYLDL GTSLTPAWEV DVAVRHEKFS DFGSTTNGKF ATRYQFDPRV ALRASVSSGF RAPSLVQEHY TGLSVGPTIA LGLLAANSPA AKMLGADELQ PEKSTSFNLG LVLNPWENVG LNIDAYQISI RDRIVDSATY SGQEAIDALA AAGISLPASA STVSTHYLAN GADTRTRGVD ITGHYLVALG EYGQVDWELS ANFNRTTLRK NHRGANGEPL LNAQQVAWIT SSTPRSQVSL GGTWSRQDWE VSLRLTRYGR TSSELDYTVG PDAWSTEKFN HFVNDPKYIT DIAARYRLSA DLTLTAGADN LFDVRPDKLP AQNTTYGDVL RYDTYASQIG FNGAFYYLRA AYRF
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