Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23540 |
Symbol | act |
ID | 4381135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2050430 |
End bp | 2051350 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639324454 |
Product | putative transcriptional regulator |
Protein accession | YP_790038 |
Protein GI | 116051131 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00483794 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGGGCTTG ATGATGCGCT GATCTTCACC CGCGTGGTGG AGTACCACAG CTTCACCCAG GCCGCGCAGA GCCTGGGCAT GCAGAAGTCC ACGGTGAGCC GGCGCATCGC CCTGCTGGAG GAGCGCCTGG GCGTGCGCCT GCTCAATCGC ACCACCCGTA AGTTGCGCCT GACCGAAGTA GGGCAGGCCT ACTACGAGCG CTGCCGGCAG ATCATGCACG ATTTCGCCGA GGCCGAGCAG GCGGTCATGC AGTTGCAACA GGCGCCGTCG GGATTGCTGC GGATCACCTC GCCGATAGAG TTCGGCCAGA TGTTCCTCGC CAGCCTGCTG GGCGACTTCA TGCGCCAGTA CCCGCAGATC ACCGCCGAGG TCGAGCTGGC CTCGCGCAGC GTCGATCCGC TGCAGGAGGG CGTCGACATC GTGATCATGG TCGGCCAGCC GGAGGATTCC ACCCTGGTGG CCCGTCGCCT GCTCTCTACC AGCCGCTGGC TCTGCGCCAG CCCCGACTAC CTGGCGGCGC ACGGCACGCC GACATCGGTG GCCGAGCTTG CCGGGCATCG CGCGGTCCTT CTGTCCACCG ACTCCCAGCG CTACTGGCCG CTTTCCGGAG ACAGCCTGCC CTGCCAGCGG GTGCTGTCCT GCAACAACAT CACCTTCGCC CGCGAGGCGG TGGTCGCCGG TGCCGGCATT GCCGCGCTAC CGGCGCTGAT CTGTGCGGAG AGCGTGCACA GCGGGCGTCT GGTGCGTTTG CTGGCGGACG TGCCGTTGCC GGTCGGCGAA CTGTATGCGG TCTATCCTTC GCGGCGTTTC CAGGCGATGA AGGTCAAGGC CTTCCTCGAT TTCCTGATCA GCCGCCTGCC GGCCGACACC GGTCGTTTAC TGGAGCCGGA GGCGGCCCGC CTGATAACAT CGCGCCCCTG A
|
Protein sequence | MGLDDALIFT RVVEYHSFTQ AAQSLGMQKS TVSRRIALLE ERLGVRLLNR TTRKLRLTEV GQAYYERCRQ IMHDFAEAEQ AVMQLQQAPS GLLRITSPIE FGQMFLASLL GDFMRQYPQI TAEVELASRS VDPLQEGVDI VIMVGQPEDS TLVARRLLST SRWLCASPDY LAAHGTPTSV AELAGHRAVL LSTDSQRYWP LSGDSLPCQR VLSCNNITFA REAVVAGAGI AALPALICAE SVHSGRLVRL LADVPLPVGE LYAVYPSRRF QAMKVKAFLD FLISRLPADT GRLLEPEAAR LITSRP
|
| |