| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_05390 |
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| Symbol | chpA |
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| ID | 4383803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 468864 |
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| End bp | 476294 |
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| Gene Length | 7431 bp |
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| Protein Length | 2476 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639322987 |
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| Product | ChpA |
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| Protein accession | YP_788587 |
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| Protein GI | 116054144 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.812783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACC GGCACGACTA CGTCGCTCTG GAATGGGTGA AAGGCGAGAT CGCCGAAACC
CTGAAACAGG CGCGCCAGGC GCTGGAAGCG TTCGTCGAGA ACCCGCAGGA CCCGACCCGC
ATGCGGTTCT GCCTGACCTA CGTGCACCAG GTGCAGGGCA CCCTGCAGAT GGTCGAGTTC
TACGGCGCGG CCCTGCTCGC CGAGGAAATG GAGCAGTTGG TCCAGGCCTT GCTGGACGGT
CGCGTGCCGA ACCAGAGCGA GGCCCTGGAA GTGCTGATGC AGGCGATCCT GCAACTGCCG
GTCTACCTCG ACCGGATCCA GACCGCCCGG CGCGACCTGC CGATGGTGGT CCTGCCGCTG
CTCAACGACC TGCGCGCCGC GCGCGGCGAG AAGCTGCTCT CGGAAACCAG CCTGTTCGCG
CCCGACCTGT CGCAGCGCCA GCCGCAATTG GACGGCGAGG CCATCGCGCA ACTGCGCACC
GACGAACTCG GCGGCTTGCT GCGCAAGCTG CGCCAGACCC AGCAGATGGC CCTGGTCGGC
CTGCTGCGCA ACCAGGACGT GGCCACCAGC CTCGGCTACC TGGCGCGTGT CTATGCGCGC
CTGGAGGGCC TGTGCCGCGA GGCACCGCTG GGGCCGCTGT GGAGCATCGC TTCCGGCCTG
GTCGAGGGCC TGGCCAACGG TAGCGTGGTC AACAGCGCCT CGGTGCGCAC CCTGCTGCGC
CAGCTCGACC GCGAACTCAA GCGCCTGGTC GAGCAGGGCG CCGACGGCCT GAACCAGGCC
GCGCCGGACG AGCTGGTGAA GAACCTGCTG TTCTACGTGG CCAAGGCGCC TTCGCAGTCG
CCGCGAATCC GCGCACTGAA GGAACAGTAC CGCCTCGACG AGGCGCTGCC CGACCACGAG
ACGGTGGACG CCGAGCGCGC CCGCCTCGCC GGACCCGACC GCGACGCGAT GCGTTCGGTG
GTCGGTGCGT TGTGCGAGGA ACTGGTGCGG ATCAAGGACA GCCTCGACCT GTTCGTGCGC
AGCGACCGTG GCCACCCCTC GGAACTGGAC GCCCTCCTGG CGCCGCTCAA GCAGATCGCC
GATACCCTGG CGGTGCTCGG CTTCGGCCAA CCGCGCAAGG TCATCCTCGA CCAGTTGGAC
GTCATCCACG CCCTGGCCCA GGGCCGCCGC GAGCCGAGCG ACGCGATCCT GATGGACGTC
GCCGGCGCGT TGCTCTACGT CGAGGCCACC CTGGCCGGCA TGGCCGGTCC CGGCGACGAG
CGCAACAGCG AGGAAAGCCG CCTGCCCACC ACCGATGTGG CGCAAATCCA CCAGTTGGTG
ATCAAGGAAG CGCGCAACGG TCTGGAGCAG GCCAAGGACG CGATCATCGA GTTCATCGCC
TCGCAGTGGA ACCACGAGCA CCTGGCCCGC GTGCCGGAGC TGCTGACCCA GGTCCGCGGC
GGCCTGGCGA TGATCCCGCT GGAGCGCGCC GCGACCCTGC TGGAAACCTG CAACCGCTAT
ATCCAGGAAC AGCTGCTGGC GCGCAAGGCG GTGCCGGACT GGCAGAGCCT GGATACCCTG
GCCGATGCCA TCACCAGCGT CGAGTATTAC CTGGAGCGCC TGAGCGAGGA CCATGCCAGC
CAGAGCGACC TGATCCTCGA CGTCGCCGAG GACAGCTTGG CGAACCTCGG CTATACGCTG
AAACCGAATT CGTCGGCCCC GGCCGAGCCC GGCCTGTCCG GGCCCGCTGC CATCGCGTCC
CCGGCTGCCG AGCCGGAGAG GCCGGAGGCG GTCGTCGAGG TCGCCGAGAC AGCGGAGCAA
CCGCCCGCCG ACACGGCTCC TGCCGAGGCG GCGAGGGGAG ATGCCCCGCT GCTGGCCAGC
GACGACAACT GGACCCTTGG CGAAGTCGCG CCCGACGCCG GCGAGCCGTC CCTCGACCTG
GCCCTGGACC TGCCGCTGGA CGATTCCGCC GAAGTGCCGC CGGCGTTGCC GGAGGTGGTC
GAGGAGAGCG GCCAGCCGCA GTCGACCCCG GCGCCTGCCC GCAGCCTGGA CGATTTCAGC
CTCGACGAGA TCGATCTCTC CGGCCTCGAC CTGCCCGCCG ATGCGGCCCC GGCCTCCGGG
CCGGCGGCCC TGGCGGACTG GTCGCTGCCG GAGCAGTGGG GGCTCGGCGA TGACCTGGCG
CAGCCGGCGC AGGCCGACGA GACGTTGGAT CTGAGCCTGG AGGAGCCGGC GCTGTCCTTC
GACGCGCCGC TGGAAAGCCT CGAGCCGTTG CCGGCGCTGG AGCCTTTCGA CGGCTCCGCT
GAACAGGAGC TGGTTCTCGA TGCGCTCGAT CCGCTGCCGT TGGATGTAGC CTTGCCGGAG
GCGGAGGGCG AGGTGTCCGC CTGGGAGGGC TCGAGCCTGG AGGAACTGGA TCTTTCCGAC
CTCGATCTCC CCGAGGTGCA ATTGCCCGAG GCCGAGGCGC CGCCTGCCGC CGAGGCGCTC
GCCAGCGCAG CGCCGGCCCT GTCTCTGGCC GAGGTGATGG CTGCGCCGGT GCAGCCGATC
AACCCGCCGG CGCAGAACGT TCCGGTCAGC CTGCTGCCGC CGCCGGCCGA CGAGGAGCCG
GTGGACGAGG AACTGCGCGA GGTCTTCATC GAGGAGGCCG GCGAGGTCCT GGAGACCCTC
GGCCGCTACC TGCCGGCCTG GAAAGCCGAC CACGACGACC GCGACGCGCT GACCGAGGTA
CGCCGTGCCT TCCATACCCT CAAGGGCAGC GGACGGATGG TCCGTGCCCT GGTGATCGGC
GAACTGGCCT GGTCGATAGA GAACCTGTTC AACCGCGTGC TCGATCGCAG CATCGCCGCC
AGCGAGCCGG TTCAGCGAGT GGTGGACCAG GTCGTGGCCC TGTTGCCTGA GCTGGTCGAG
GAGTTCGCCG CCAATGCCCA GCGCCAGCGC GACGATGTCG ACCTGCTGGC GGCCACCGCG
CATGCCCTGG CCAAGGGCGA GCCGCTGCCG GAACCGCCGG CGCCGGACGA CGGCGGAGTA
CCGCCGGAAG CCGGGGCGGA GCAGCCGTCG AGCCTGGAGA ACGGAGTCCA GGCGCCGCCA
TTGGCCGACG CGCCGCAGGC CGCTGCCGAG GCGCAGAGCG ACGTCGAACT GCTCGATCCG
CAACTGCTGG AGATCTTCAC CAACGAGGCG GAGACCCATC TCGAGGCCCT GGTCGGCTTC
CTCGCCGACT GCGCCCGCGA ACTGCCGCAG CCGGTCACCG ATGCCTTGCA GCGTGCCCTG
CATACCCTCA AGGGTAGCGC GCACATGGCC GGCATCCTGC CGATCGCGGA GATCGCCACG
CCGCTGGAAA AACTGGTCAA GGAATACAAG TCCAACCTGC TCGCCTTCGA CCTGCGCGAA
GCCGAGTTGC TGCACGACGC CGAGCAACTG TTCCGCATCG GCCTGGAACA GGTCGGTGCG
CACCGGCCGT TGAACCCGAT CCCCGGCAGC GATGCGCTGC TGGAGCGTAT CGAGGCACTG
CACCAGGAGC GCATCGCCTC GCTCGAGGCC GAGCGCTACA GCGATGCCGG CGAGCGCCGC
GATCCGTTGC TGATCGAGGC GTTCCTCGTC GAAGGCATGG ACATCCTGCT GGACGCCGAG
GACTTGCTCG AGCGCTGGCA CGAGCATCCG CAGGAGCGCC AGGAGCTGAG CGCGCTGCGC
GAGGAACTCA GCGCTCTGGA CCAGGGCGCC CGGCATGCCG AGCTGCCGCA GGTGGAAGAA
CTCTGCCAGG CCTTGCTGGC GCTCTACGAT GCCGTCGAGG AAGGCCGCCT GGCGGTCAGC
CCGGCGTTCT TCGAGGAAGC CCGCCAGGCC CATGAGGCGC TGATCGGGAT GATGGACCAG
GTCGCCGCCG GCCTGCAGGT CACGCCGCGT CCGGAGCGGG TCGCGGCCCT GCAGGAACTG
TTGGAAGCGC CCGCCGCCGA GGCCGTTCCG TTCATCGACC CGGAGAGCCT CGGCGCCGAC
GATTTCCCCC CGGAAGACGA AGAGCTGGCC CTCCCCGAGG CGGTCTTCGA AGAGGCCGGG
ACGCCTGCCG AGGAGACCGT ACCGGCAGCG CCTGCACCGG CTCCCGGCCG CGAGCTGGAC
GAGGAAATGG TGTCGATCTT CCTCGAAGAG GCGGTGGACA TCCTCGAAAG CGCCGGCCAG
GCACTGGCCC AATGGCAGGC CGAGCCGGGC GCGCTGTCTT CGCTCAGCGC CCTGCAGCGC
GACCTGCACA CCCTCAAGGG CGGCGCACGG ATGGCCGAGA TCGCCGAGAT CGGCGACCTG
GCCCACGAGC TGGAGGCCCT CTATGAAGGA CTGGTCGACC GCCGTTACCA GCACTCCCCG
CAACTGGCCG GATTGCTGCA AGCCTGTCAC GACCGCCTGG CCGAACAGCT CGACCAGTTG
AGCGCCGGCC AGCCCCTGGC CGACCCGCAC GACCTTATCC AGGCGATCCG CCGGTTCCGC
CAGGGCCCGC TGGCCGAGGC CGCGACACCG GGCGAGGCGG AAAGCCCCGT CGAGGAACTC
GTTGCACCGG CCGTCGAGGT GCCCGCCGCG CCTGCCGCGA CGCAGCCGCC CGCTGCGGAG
GCGTTCGAAG AGCGCGATCC CGAACTGGTG GAGATCTTCC TCGAGGAAGG CTTCGATATC
CTCGACAGCG CTGCCGCCGC GTTGCAGCGC TGGATCGACG ACGTCGACAA CACCATCGAA
CTGGAAGCCT TGCAGCGCGA CCTGCATACC CTCAAGGGCG GTGCGCGGAT GGCCGAGATC
GGCGAGATCG GCGACCTCGC CCATGAGCTT GAATTCCTCT ACGAAGGCCT CTGCGGCGGA
CGCCTGCGCG CCAGCCCGGC CTTGTTCGGC CTGCTGCAGC GCTGCCACGA CGAGCTGGCC
GAGATGCTCG AGGCGGTGCG TGGCCATCGC ACGCTGCCCG ACGGGCAGGC GCTGATCGCG
GAGATCAGGC GCCTGCGCAG CGATCCCGAC GAGCAACTGA GCGTACCCAC CAGCGTCAGC
CTCAAGCCGC TGGCGGCGAA GGGTGCGGCG GCCGACGAGA GCGAGATCCT CGACATCTTC
CTCGAGGAAG CCGACGACCT GCTGGAGAAC CTCGAACTGG CGCTCGGCCG CTGGGACGGC
GGCAACGGCG ACGCCCAGCC GCTGGACGAC CTGCTGCGGA TCCTGCACAC CCTCAAGGGC
GGTGCGCGCC TGGCCGGGCA GACCGAGCTG GGCAACCTGG CCCACGACCT CGAGCAGCAT
CTCACCGATG CGCAGCAACA GGGCGCGCCG TGGCCGGACA GCCTGCTGCT GGATGCGCAG
TCGGGGCTGG AAGGCCTGCA GCGGCAGGTC GACCTGTTGC GCGAGCGGCT GGCCGAGGAC
GACGAGGCCG GTGAACGGCC CGAGCCCGCC CAGGCGCTGG TCCAGGCCGA CGATACCGAC
CGCGCGGTGG CCTCCGCGCT GGCCGAGCTG ACCCGCCTGG CCCCGGCGGC CGGCGCGATC
ATGGCGGCCG AGGCGGCGCC TCCGGCTGCT CCGGCCACCA CCCTGCCGTT CGTGCGCAAG
GCCCAGGAGG CGGCCCAGGA GGCCGCTTCC CGGCGTGCCC CGCAGGAACT GGTGAAGGTG
CCGGCGGAAC TGCTGGAGAA CCTGGTCAAC CTGGCGGGCG AGACCTCGAT CTTCCGCGGC
CGGGTCGAGC AGCAGGTGAG CGACGTCGGC TTCACCCTCG GCGAGATGGA GTCCACCATC
GAGCGGGTGC GCGACCAGTT GCGCCGCCTC GACACCGAGA CCCAGGCGCA GATCCTCTCG
CGTCACCAGG CCGATGCCGA ACGCGCCGGC TACGAAGAAT TCGACCCGCT GGAAATGGAC
CGCTATTCGC AGTTGCAGCA GCTCTCGCGC GCACTCTTCG AATCGGCCTC CGACCTTCTC
GACCTGAAGG AAACCCTGGC GGCGAAGAAC CGCGACGCGG AGACCCTGCT GCTGCAACAG
GCGCGGGTCA ACACCGAACT CCAGGAAGGC CTGATGCGTA CCCGCATGGT GCCGTTCGAT
CGGCTGGTAC CGCGTTTGCG GCGGATCGTC CGGCAGGTGG CCGGCGAACT CGGCAAGCAG
GTCGAGTTCG TGGTCGGCAA CGCCGACGGC GAGATGGATC GTACCGTTCT CGAACGCATC
GTCGCGCCGC TGGAGCACAT GCTGCGCAAC GCCGTGGACC ACGGCATCGA GTCCGGCGAG
ACACGCCGCG CGGCGGGCAA GCCGGAGCAC GGTACGATCC GCCTGAACAT CGGCCGCGAG
GGCGGCGACA TCCTCCTCAC CCTCTCCGAC GACGGCGCCG GCATCCGCCT CGACGCGGTA
CGGCGCAAGG CCATCGAGCG TGGCCTGATG AGCGCCGACA GCGACCTCAG CGATCATGAA
GTGCTGCAGT TCGTGCTCGA GTCCGGCTTC TCCACCGCCG AAAAGGTCAC CCAGATCTCC
GGGCGCGGCG TCGGCCTCGA CGTGGCCAAC TCCGAGGTCA AGCAGCTCGG CGGCTCGGTG
AGCATCCAGA CCGAGCCGGG CCAGGGCACC CGCTTCAACG TGCGGCTGCC GTTCACCGTG
TCGGTGAACC GGGCGCTGAT GGTGCTATCC GGCGAGGATC TCTACGCGGT GCCGCTGAAC
ACCATCGAGG GCATCGTGCG GGTTTCGCCC TACGAACTGG AGGCGCTCTA CGACCAGCGC
GGCGAGGCGG GGCTGGATAC GCCCAGCTTC GAATACGCCG GGCAGTCCTA CGAACTGAAG
TACCTCGGCG AGCTGCTGAA CAACGGCCAG GAACCCAAGC TGGTCGGCCA GTCGCTGCCC
TTGCCGGTGA TCCTGGTGCG CTCCTCGGAG CATGCGGTGG CGGTGCAGGT CGACTCGCTG
GCCGGTTCCC GCGAGATCGT GGTGAAGAGC CTCGGTCCGC AGTTCGCCGG GGTCGCCGGG
ATTTCCGGGG CGACCCTGCT CGGCGATGGC CGGGTGGTGG TGATCCTCGA CCTGCTGGCG
ACCATCCGCT CCCGGCACGC GCTGCTCGGC CAGGAAAACC GTCGCGAACG CCTGGCGCTG
CGCCAGGAAA TGGCGGCGAG CGAAAGCGAG CAGCAGCGGC CGCCGCTGGT CATGGTGGTG
GACGACTCGG TCACCGTGCG CAAGGTCACC ACCCGCCTGC TGGAGCGCAA CGGCATGAAC
GTGCTGACCG CGAAGGACGG CGTGGACGCC ATCGCCCAGC TCCAGGAGCA CCGTCCGGAC
ATCCTCCTGC TGGACATCGA GATGCCGCGC ATGGACGGTT TCGAGGTCGC CACCCTGGTG
CGCCACGACG AGCGCCTGGG CAACCTGCCG ATCATCATGA TCACCTCGCG GACCGGCGAG
AAACACCGCG AGCGCGCGCT GGGCATCGGC GTCAACCAGT ACCTCGGCAA GCCTTACCAG
GAAACCGAGC TGCTCGAAGC CATCCAGTCC CTGGTCGGCC AGCATGAGTG A
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| Protein sequence | MGDRHDYVAL EWVKGEIAET LKQARQALEA FVENPQDPTR MRFCLTYVHQ VQGTLQMVEF
YGAALLAEEM EQLVQALLDG RVPNQSEALE VLMQAILQLP VYLDRIQTAR RDLPMVVLPL
LNDLRAARGE KLLSETSLFA PDLSQRQPQL DGEAIAQLRT DELGGLLRKL RQTQQMALVG
LLRNQDVATS LGYLARVYAR LEGLCREAPL GPLWSIASGL VEGLANGSVV NSASVRTLLR
QLDRELKRLV EQGADGLNQA APDELVKNLL FYVAKAPSQS PRIRALKEQY RLDEALPDHE
TVDAERARLA GPDRDAMRSV VGALCEELVR IKDSLDLFVR SDRGHPSELD ALLAPLKQIA
DTLAVLGFGQ PRKVILDQLD VIHALAQGRR EPSDAILMDV AGALLYVEAT LAGMAGPGDE
RNSEESRLPT TDVAQIHQLV IKEARNGLEQ AKDAIIEFIA SQWNHEHLAR VPELLTQVRG
GLAMIPLERA ATLLETCNRY IQEQLLARKA VPDWQSLDTL ADAITSVEYY LERLSEDHAS
QSDLILDVAE DSLANLGYTL KPNSSAPAEP GLSGPAAIAS PAAEPERPEA VVEVAETAEQ
PPADTAPAEA ARGDAPLLAS DDNWTLGEVA PDAGEPSLDL ALDLPLDDSA EVPPALPEVV
EESGQPQSTP APARSLDDFS LDEIDLSGLD LPADAAPASG PAALADWSLP EQWGLGDDLA
QPAQADETLD LSLEEPALSF DAPLESLEPL PALEPFDGSA EQELVLDALD PLPLDVALPE
AEGEVSAWEG SSLEELDLSD LDLPEVQLPE AEAPPAAEAL ASAAPALSLA EVMAAPVQPI
NPPAQNVPVS LLPPPADEEP VDEELREVFI EEAGEVLETL GRYLPAWKAD HDDRDALTEV
RRAFHTLKGS GRMVRALVIG ELAWSIENLF NRVLDRSIAA SEPVQRVVDQ VVALLPELVE
EFAANAQRQR DDVDLLAATA HALAKGEPLP EPPAPDDGGV PPEAGAEQPS SLENGVQAPP
LADAPQAAAE AQSDVELLDP QLLEIFTNEA ETHLEALVGF LADCARELPQ PVTDALQRAL
HTLKGSAHMA GILPIAEIAT PLEKLVKEYK SNLLAFDLRE AELLHDAEQL FRIGLEQVGA
HRPLNPIPGS DALLERIEAL HQERIASLEA ERYSDAGERR DPLLIEAFLV EGMDILLDAE
DLLERWHEHP QERQELSALR EELSALDQGA RHAELPQVEE LCQALLALYD AVEEGRLAVS
PAFFEEARQA HEALIGMMDQ VAAGLQVTPR PERVAALQEL LEAPAAEAVP FIDPESLGAD
DFPPEDEELA LPEAVFEEAG TPAEETVPAA PAPAPGRELD EEMVSIFLEE AVDILESAGQ
ALAQWQAEPG ALSSLSALQR DLHTLKGGAR MAEIAEIGDL AHELEALYEG LVDRRYQHSP
QLAGLLQACH DRLAEQLDQL SAGQPLADPH DLIQAIRRFR QGPLAEAATP GEAESPVEEL
VAPAVEVPAA PAATQPPAAE AFEERDPELV EIFLEEGFDI LDSAAAALQR WIDDVDNTIE
LEALQRDLHT LKGGARMAEI GEIGDLAHEL EFLYEGLCGG RLRASPALFG LLQRCHDELA
EMLEAVRGHR TLPDGQALIA EIRRLRSDPD EQLSVPTSVS LKPLAAKGAA ADESEILDIF
LEEADDLLEN LELALGRWDG GNGDAQPLDD LLRILHTLKG GARLAGQTEL GNLAHDLEQH
LTDAQQQGAP WPDSLLLDAQ SGLEGLQRQV DLLRERLAED DEAGERPEPA QALVQADDTD
RAVASALAEL TRLAPAAGAI MAAEAAPPAA PATTLPFVRK AQEAAQEAAS RRAPQELVKV
PAELLENLVN LAGETSIFRG RVEQQVSDVG FTLGEMESTI ERVRDQLRRL DTETQAQILS
RHQADAERAG YEEFDPLEMD RYSQLQQLSR ALFESASDLL DLKETLAAKN RDAETLLLQQ
ARVNTELQEG LMRTRMVPFD RLVPRLRRIV RQVAGELGKQ VEFVVGNADG EMDRTVLERI
VAPLEHMLRN AVDHGIESGE TRRAAGKPEH GTIRLNIGRE GGDILLTLSD DGAGIRLDAV
RRKAIERGLM SADSDLSDHE VLQFVLESGF STAEKVTQIS GRGVGLDVAN SEVKQLGGSV
SIQTEPGQGT RFNVRLPFTV SVNRALMVLS GEDLYAVPLN TIEGIVRVSP YELEALYDQR
GEAGLDTPSF EYAGQSYELK YLGELLNNGQ EPKLVGQSLP LPVILVRSSE HAVAVQVDSL
AGSREIVVKS LGPQFAGVAG ISGATLLGDG RVVVILDLLA TIRSRHALLG QENRRERLAL
RQEMAASESE QQRPPLVMVV DDSVTVRKVT TRLLERNGMN VLTAKDGVDA IAQLQEHRPD
ILLLDIEMPR MDGFEVATLV RHDERLGNLP IIMITSRTGE KHRERALGIG VNQYLGKPYQ
ETELLEAIQS LVGQHE
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