| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_6102 |
|---|
| Symbol | |
|---|
| ID | 4315006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008392 |
|---|
| Strand | + |
|---|
| Start bp | 660338 |
|---|
| End bp | 661150 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638153946 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_777980 |
|---|
| Protein GI | 115360843 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCGG AATTCGCCGA CGACGACCTC GTCCGCTTCG ACGCGCAAGG CGGCACGCCG
CTGCCCGCGG CCGATGCCGA AGGATGGCTG GACCACGACG GCGCGCGCAT CTGGCACGCG
TCGTTCGGCC ACGGCCCGCC GGTCGTGCTG CTGCACGGCG GCCTCGGCCA CGGCGGCAAC
TGGGGCAATC AGGTGCCGGC GCTGCTCGCG GCCGGCTACC GCGCGATCGT GATCGACAGC
CGCGGCCACG GCCGCAGCAC GCGCGACGAT CGCCCCTATT CGTACGACCG CATGGCCTCG
GACGTGCTCG CGGTACTCGA TGCGCTGCAC ATCGGGCGCG CGCGCTTCGT CGGCTGGAGC
GACGGCGCGT GCGTGTCGCT CGTGCTGGCC GCCCGCGCGC CGCAGCGCGC GGCGGGCGTG
TTCTTCTTCG CGTGCAACAT GGATCCCGGC GGCACGAAGG AGATGGTGCC GAGCCCGCTG
ATCGACCGCT GCTTCGCGCG ACACCGCAAG GACTACGCGC GACTGTCCGC GACGCCCGAC
CAGTTCGACG CGTTCGTCGC CGCCGTCAGC GAAATGATGC GCACGCAACC AAATTACAGC
GCGGCCGACC TCGCGGCGAT CGCGGTGCCG GTCGGGATCG TGCAGGGCGA GCACGACGAG
TTCATCCGCC CCGAGCATGC GGCCTATCTC GCGCGCACGA TTCCGGGCGC GACGCTGACG
ATCCTGCCCG GCGTGAGCCA CTTCGCGCCG CTGCAGCGGC CGGCGCGCTT CAACGCCGCG
ATGCTGGCCT TTCTCGACCG GTTGCCTGAC TGA
|
|---|
| Protein sequence | MTAEFADDDL VRFDAQGGTP LPAADAEGWL DHDGARIWHA SFGHGPPVVL LHGGLGHGGN
WGNQVPALLA AGYRAIVIDS RGHGRSTRDD RPYSYDRMAS DVLAVLDALH IGRARFVGWS
DGACVSLVLA ARAPQRAAGV FFFACNMDPG GTKEMVPSPL IDRCFARHRK DYARLSATPD
QFDAFVAAVS EMMRTQPNYS AADLAAIAVP VGIVQGEHDE FIRPEHAAYL ARTIPGATLT
ILPGVSHFAP LQRPARFNAA MLAFLDRLPD
|
|---|
| |