Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4992 |
Symbol | |
ID | 4313883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 2011322 |
End bp | 2013559 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638152835 |
Product | hypothetical protein |
Protein accession | YP_776875 |
Protein GI | 115359737 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.934351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATG ACCTTTCGCG CGTGTTGCGC TTCAAGCCGC ATTTGCTCGT GCTCGATGCG GGGCCCGAGA CCCTGTTCGT CGTCGACGAG TTCAAGCGCA CGATGCTGTC CGGTGCGATC TTCGTGCGGA TCGCCGCGTG CCTGCGGGCG CGCATGACGA CCGCCGAGAT CGTGACGACG CTTGCCGGCA CGTTCGGCGA ATGGGACGTG CTCGCGCGGC TCGACCACCT GGTGCGCCGC GGCTACGTGC GCGCCGATCC GCCGCACGAC GACGATGCCG CGCGCGGCTT CTTCGAGCGC GCCGGGCTCG ACGGTGACGC GGCTTGCGCG CGCGTCGTTC AACTGCGCGT CGCGGTCGAG GCGTTCGGTG CCGACGATGC GGCGCTCCGG CGCGCGCTCG ACACGGCCGG CATCGATGTC GTGCCGGACG CCGAACTGAC CGTCGCGATC GCCGATACGC ACGATCGCGA CGATCTCGCC GCGTGCGCCG AGCGCGTGGC GGCGCGCGGC GGGGCATTGC TCCTTGTGGC GGCCGGTGGC GTGCAGACGC TGATCGGGCC GTTGCTGGCC GGCGGCGGCG CGCTGGCCGA TGCGCCGTGC ATCGAATGCG TGCGCTACTG GATTCGCATC AACCGGCCGG TCGAGACACT GCTTGCGCGC CATCACGGCA GCGCGGCAAC GCGTCTGCCG CCGGCCGCGT CGCGTGCCGG CGCCGCTGCC GCCGCGGCGT TCGTGGCGGC GACGGTCGAG CAGATCGCGG TCAACCGCAC GATAGCGGAA CGTTCGCAAA CGCATATCGT GGCGCAGCGC ATCGATACGT TGACCGTCGA ACGGCACCGC GTGATCAGGC GTCCGCAATG CCCGTGCTGC GGCAAACCCG CATGGATGCG CGAGCAGGCG GCGCGTGCGC CGCGGCTCGC CGATCATGCG CCGTTGACGC GCGCCGACGG CGGCTACCGT ACCGCCGACC CGCAACAGGT GTTCGAGCGT TATGCCCATC TGATCTCGCC GGTCAGTGGC GCGATCGCGT ATCTGCACCC GATGCCGAAG CGGCACGCGG GCCTGCGCAA GGTCTATGCG TCGGGCTTTC TCGTGTGCCC GGCCGCCGTA CCGGGCAGCA ACCGGTTCGA CAGGATTTGC TCCGGCAAGG GCCGCACCGA CGAGCAAGCC CGCGTGAGCG CGCTATGCGA AGCGCTCGAA CGATTCAGCA GCGTGTATCA GGGCGACGAG GCGAGGCTGA CCGGCAGCAT GGAAAGCCTG CTCGCCGATC AGGCTTGCGA CGCCGAGCCC ATCCACGTGA ATGAGCTTCA GCAGTTCAGC GAACGGCAAT TCGCGGCGCG CGACGCGATC AACGCATTGA CCCGCGATGT CCGCAAGCAG GTGCCGCCGC GCTTCACGTC GCGCGACGTG ATCGACTGGA CGCCTGCATG GTCGCTCGTG AGCGGCCGGC GCCGCCTCGT GCCGCTGAGT TACTGCTATG CGGAAACGCC GGACAGTGCA CAGGCGCCGG CCGCGTGCGT GCACAACCCC AACGGCTGCG CGGCGGGTTC GAGCATCGAC GAGGCGATTC TGCAAGGCAT GCTCGAGTTG ATCGAGCGCG ATGCGGTCGC GATCTGGTGG TACAACCGGC TTGCACGCCC CGGCATCGAT CTCGCGAGCT TCGATGATTC GTATTTCGAT GCGCTCGTGC GCGAATACGC GACGCTCGGG TGGCGTTTGT GGGCGCTCGA CATCACCACC GATCTCGAGG TGCCGACCGT GGCCGCGCTC GCGGAAAATC CGCAAGACGG GCGCTTCTCG ATCGGTTTCG GCTGCCATCC GGACGGTCGG ATCGCGGTGC AGCGGGCACT GACCGAAGTC AACCAGTTGC TCGATGTCGC CGCGGATGCG CCGCATCCGT GGGACCGCGA CAAGCTCCCG GCAACCGGAT TTTTGTATCC GGCGGCCGGC GCGCGTGCAA CGACGCGTTC GACTTGGGAA CCGGTCGAGG CCGCGTCGCT ACCGGCAGCG CTCGCGCATT GCATCGGGCG CATCGCGGCG GCCGGCATGG ACGTGCTCGT CGTCGACAAG ACGCGGCCCG ACATCGGCTT GTCCGTGGTG CAGGTCATCG CGCCGGGGCT GTGTCATTTC TGGCCGCGGT TCGGCGCGCG ACGGTTGTAT TCGGTGCCGG TCGAACGCGG TTGGCGTGCG CAGCCGTGCG ACGAGATGGA GCTGAATCCG GCGCTGCTGT TTCTGTGA
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Protein sequence | MLDDLSRVLR FKPHLLVLDA GPETLFVVDE FKRTMLSGAI FVRIAACLRA RMTTAEIVTT LAGTFGEWDV LARLDHLVRR GYVRADPPHD DDAARGFFER AGLDGDAACA RVVQLRVAVE AFGADDAALR RALDTAGIDV VPDAELTVAI ADTHDRDDLA ACAERVAARG GALLLVAAGG VQTLIGPLLA GGGALADAPC IECVRYWIRI NRPVETLLAR HHGSAATRLP PAASRAGAAA AAAFVAATVE QIAVNRTIAE RSQTHIVAQR IDTLTVERHR VIRRPQCPCC GKPAWMREQA ARAPRLADHA PLTRADGGYR TADPQQVFER YAHLISPVSG AIAYLHPMPK RHAGLRKVYA SGFLVCPAAV PGSNRFDRIC SGKGRTDEQA RVSALCEALE RFSSVYQGDE ARLTGSMESL LADQACDAEP IHVNELQQFS ERQFAARDAI NALTRDVRKQ VPPRFTSRDV IDWTPAWSLV SGRRRLVPLS YCYAETPDSA QAPAACVHNP NGCAAGSSID EAILQGMLEL IERDAVAIWW YNRLARPGID LASFDDSYFD ALVREYATLG WRLWALDITT DLEVPTVAAL AENPQDGRFS IGFGCHPDGR IAVQRALTEV NQLLDVAADA PHPWDRDKLP ATGFLYPAAG ARATTRSTWE PVEAASLPAA LAHCIGRIAA AGMDVLVVDK TRPDIGLSVV QVIAPGLCHF WPRFGARRLY SVPVERGWRA QPCDEMELNP ALLFL
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