| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4106 |
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| Symbol | |
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| ID | 4313001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1027343 |
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| End bp | 1028422 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151947 |
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| Product | porin |
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| Protein accession | YP_775993 |
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| Protein GI | 115358855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.437968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0586067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAGC AAGCGGTAGC AGCAGCAGTG ATCGGAATGA GCGCCGTGTC CGGCGCGTGG
GCGCAGAGCA GCGTGGTGCT GTACGGCAGC ATGGATGCCG GCGTCGCGTA CGTGAACAAC
GTCGGCGGCC ATGCGAAGTG GGCAATGATC CAGGGCAACA CGCAGCCCGA CCGGTGGGGC
CTGAAAGGCA AGGAAGACCT CGGCGGCGGC CTGTCGGCGA TCTTCCAGCT GGAAAACGGC
TTCTATACGA ACAACGGCCA GTTCGCGACC GCGAACACGA TCTGGAACCG CGCGGCGTTC
GTCGGGCTCA GCTCGGAGCG CTACGGCACG CTGACGCTCG GCCGCCAGAC GCCGCTGACG
TTCGACTATC TCGATCCGCT CAGCACCGCG TATCTCGCGA TGAGCTGGTA TGCGTTCCAC
CCCGGCAACA TCGACGGGCT CGCCGCGACC GGCAACGTGC CGTACAACAA CGCGGTCAAG
TACCGTTCGC CGAGCTTCGG CGGCTTCTCG GCCGCGGCGA CGATGGCGCT CGGCAACACG
ACGAACTTCT CGACCGGCAA GTCGGTCGGC GTCGCGCTGA ACTATGCGAA CGGGCCGTTC
AAGGCGTCGG CCGTCTACTC GAACGAGCAC GACCGCGCGA TCCTGATCAG CCAGACGGGG
ATCACGTCGT TCCAGGGGCA AAATACCGCG AACGGCTATC TGGCGAACAA GGTCGAGAAC
ATCGGCGCGG GCGCGTCGTA CCAGATCGGC GACTTCCTCG TGCACGGCCT CTACACGCGC
GTGAAGATGC AGTCGAACGG GTTTTCCGAC ACGTTCCAGA GCTACGACGC GGGCGTGAAC
TATCGCAGCA GCGCGTTCAA CACGATCGCG GGCGGCGCGG CGACCACGAC GCTGGCCGGC
CGCCGCTGGA CTCAGGTCGA GCTCGGCGAC ATCTATTCGC TGTCCAAGCG CACGCAGCTC
TATGCGAACG TGCTGTTCGA GCACGGCTCG GGCGGCGCGA AGGCCTCGTT CTTCACGGCC
GGCACGTCGA GCACCGCGAA CCAGGTGATC GTGCTGACCG GCATCCACCA TTCGTTCTGA
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| Protein sequence | MVKQAVAAAV IGMSAVSGAW AQSSVVLYGS MDAGVAYVNN VGGHAKWAMI QGNTQPDRWG
LKGKEDLGGG LSAIFQLENG FYTNNGQFAT ANTIWNRAAF VGLSSERYGT LTLGRQTPLT
FDYLDPLSTA YLAMSWYAFH PGNIDGLAAT GNVPYNNAVK YRSPSFGGFS AAATMALGNT
TNFSTGKSVG VALNYANGPF KASAVYSNEH DRAILISQTG ITSFQGQNTA NGYLANKVEN
IGAGASYQIG DFLVHGLYTR VKMQSNGFSD TFQSYDAGVN YRSSAFNTIA GGAATTTLAG
RRWTQVELGD IYSLSKRTQL YANVLFEHGS GGAKASFFTA GTSSTANQVI VLTGIHHSF
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