Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3649 |
Symbol | |
ID | 4312545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 495193 |
End bp | 497085 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151491 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_775537 |
Protein GI | 115358399 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00810793 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGTGA AAAAGAAGAC CCACCCCGCC GATCCGTACG CCGCCGCGAC CAAGCATCCG ATGCTCGCGT CGCGCCTGCC GATGTGGCGC TCGAAACTGG TCGTGATCAT GGTGTCCCTC GGATTCGCCG CGCTGATCGG ACGCGCGTTC TGGGTGCAGG TCGCGAACCA GGATTTCTAT GTCGGGCAAG GCCAGAAGCG CTACCAGCGC ACGATCGAGC TCGACGCGAT GCGCGGCCGC ATCGTCGATC GCAACGGCGC GATGCTCGCG GTCAGCCTGT CGACCTATGA AATCTGGGCG AACCCGAAAC AGGTCGCCGA AATCGACTAT CCGCAGCTCG CGAAGCTGCT CGACATGCCG CTCGCGGAAA TAAAACGCCG CCTGCGCAAC GACCGTACGT TCGTGCTGCT GAAGCGGCAG GTCGACGCCG ATACCGCGGG CCGGCTCGAC AAGCTCGCGA TCGACGGCAT CACGCAGATC GCCGATTCGA AGCGCTTCTA TCCGGAAGGC GAGTCGGCCG CGCACGTGGT CGGCTTCACC AACGTCGAGG ACAAGGGCCA GGAAGGCGTC GAACTCGCGG CGAATGCGCG GCTGTCGGGG ACGTCCGGAC AGCGCGAGGT GATCCGCGAC CGGCTCGGGC GCATCGTGTC CGACACGCGC CCGCTCGTGC CCGCGCAGCA CGGCGCGACG ATCGAACTGA CGATCGACCG GCGCATCCAG CAGCTCGCGT TCAGCCAGCT CAAGGCCGCG GTGCTCGAGA ACAATGCGGT GGCCGGCAGC GTCGTCGTGC TCGACGCGCA GAACGGCGAA ATCCTCGCGC TCTCGAACTA CCCGACCTTC GATCCGAACG ATCGCTTCCG GCTGACCGGC CAGCAGTTGC GCAACCGCGC GGTGATCGAC ACGTTCGAGC CCGGCTCGAC GATCAAGCCG CTCGTCGTCG CGCTGTCGAT CGACGAGCGC AAGGTCACGC CGAACACGAT CATCAACACG TCGCCGGGCA CCTACAAGAT CGGCCCGGCC GTGATCCACG ACACGTCGAA CCACGGCTCG CTGACCGTGT CGGAGGCGCT GCAGAAGTCG AGCAACGTCG CGCTCGCCAA GCTGGCGCTG AACCTGCCCG CTGAAACGAT CTGGAACAAG TATCAGGAAT ACGGGATCGG CCGCGCGCCG GAGCTGACGT TCCCGGGCGT CGCGTCGGGC CGCCTGCGCG GCTACAAGCG CTGGCGGCCG ATCGAGCAGG CGACGATGGC GTACGGCTAC GGGCTGTCGA TGTCGCTGCT GCAGATCGCG CAGACCTACA CCGCCTATGC GGGCGACGGC ACGCTGCACC CGGTGTCGCT GCTGAAGAGC GGCACCGACC CGCTGACGAT GGATTCCCGT CGCGGGCACC GCGTGACGTC GCCGCAAACC GCGGCGGCGA TCCGCGCGAT GCTCGAGTCG GCGGTCGGCG AAGGCGGCAC GGGGCGCCGC GCACGGGTCG ACGGCTACCG GATCGGCGGC AAGACGGGCA CGGCGCGCAA GCAGGTCGGC GCGACCTATG CGAAGGGCAA GTACCGCGCA CTGTTCGCGG GGATGGCGCC GATGAGCAAC CCGCGCCTGA TCGTCGCGGT GATGATCGAC GAGCCGCGCG GCAAGGGCTA CTACGGCGGC ACGGTGGCCG GCCCGGTGTT CTCGTCGGTC ACGAGCGGCG CGCTGCAGTT GCTCGGCGTG CCGCCCGATG CACCGGTCGA GCCGACGCCG AACGCGCCGG CCAGGGGCGC GGCCCCGCAG AAGCCGGGCG CGGCACCGAA GGCTGCGGCG CAGCCGAAGA CGGCGGCCGC GCAGAAGGCG GCGACGTCGG TGAAGACGGC CGCGCAATCC GGCGCGACCG TACAGGCGAA GGCGGCGGGC TGA
|
Protein sequence | MSVKKKTHPA DPYAAATKHP MLASRLPMWR SKLVVIMVSL GFAALIGRAF WVQVANQDFY VGQGQKRYQR TIELDAMRGR IVDRNGAMLA VSLSTYEIWA NPKQVAEIDY PQLAKLLDMP LAEIKRRLRN DRTFVLLKRQ VDADTAGRLD KLAIDGITQI ADSKRFYPEG ESAAHVVGFT NVEDKGQEGV ELAANARLSG TSGQREVIRD RLGRIVSDTR PLVPAQHGAT IELTIDRRIQ QLAFSQLKAA VLENNAVAGS VVVLDAQNGE ILALSNYPTF DPNDRFRLTG QQLRNRAVID TFEPGSTIKP LVVALSIDER KVTPNTIINT SPGTYKIGPA VIHDTSNHGS LTVSEALQKS SNVALAKLAL NLPAETIWNK YQEYGIGRAP ELTFPGVASG RLRGYKRWRP IEQATMAYGY GLSMSLLQIA QTYTAYAGDG TLHPVSLLKS GTDPLTMDSR RGHRVTSPQT AAAIRAMLES AVGEGGTGRR ARVDGYRIGG KTGTARKQVG ATYAKGKYRA LFAGMAPMSN PRLIVAVMID EPRGKGYYGG TVAGPVFSSV TSGALQLLGV PPDAPVEPTP NAPARGAAPQ KPGAAPKAAA QPKTAAAQKA ATSVKTAAQS GATVQAKAAG
|
| |