| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3458 |
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| Symbol | |
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| ID | 4312193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 255648 |
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| End bp | 257141 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151300 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_775346 |
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| Protein GI | 115358208 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.71207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACG TCAGCGAGCG CCCGGCCGAC ACGGCCGGCG GCGCGGATCC CCGTCATGCC
GAGCGCGATG CGATGTTCGC GTCGCACGAA GCCGGCTATG CGAAACAGTT GAAGCCGCGC
CACGTGCAGA TGATCGCGAT GGGCGGTGCG ATCGGCACCG GCCTCTTTCT CGGCGCGGGC
GGCCGCCTGC AGAGCGCGGG ACCCGCGCTG GCGGTCGTGT ATCTCGTGTG CGGCGTATTC
GCATTCCTGA TCATGCGCGC GCTCGGCGAG CTGGTGATGC ACCGGCCGAC CAGCGGCGCG
TTCGTGTCGT ACGCACGGGA GTTCATGGGC GAGCGCGCGT CGTTCGTCGC GGGCTGGATG
TACTACCTGA ACTGGGCGAC CACCGGCATC GTCGACATCA CCGCGGTCGC GATCTACATG
AAGTACTGGG CCGCGTTCTC GGACGTGCCG CAGTGGGTGT TCGCGCTCGG CGCGCTCGGC
ATCGTGTCGG TGATGAACAT GATCGGCGTG AAGGTGTTCG GCGAGATGGA GTTCTGGTTC
TCGATCGTGA AGGTGGGCAC GCTCGCGCTG TTCCTCGGGG TCGGCGCCGT GTTCCTCGCG
AGCGGCCATC CGGTCGCCGG CCAGATGCCG GGGCTGCACC TGATCGCGGA TCACGGCGGG
ATCTTTCCGC ACGGCATCCT GCCGGCGGTG CTGATCGTGC AGGGCGTCGT GTTCGCGTAT
GCGAGCATCG AGCTCGTCGG CGTCGCGGCG GGCGAGACCG CCGATGCGCG CAAGGTGCTG
CCGAAGGCGA TCAACAGCGT GATGTGGCGC ATCGCGCTGT TCTACGTGGG CTCGGTCGTG
CTGCTGACGA TGCTGCTGCC GTGGACCGCG TACAGCGCGC ACGAAAGCCC GTTCGTGACG
TTCTTCAGCA AGCTCGGCGT GCCGTACGTC GGCACGGTGA TGAACGTCGT GGTGCTGACC
GCCGCGCTGT CGAGCCTGAA CTCCGGCCTC TATTCGACCG GGCGCGTGCT GCGTTCGCTC
GCGATGGGCG GCTCGGCGCC GCGCTTCGTG TCGCGGATGA ACGCGCGCGG CGTGCCGTAC
GGCGGGATCC TCGTCACGGT CGCGGTCAAC GCGATCGGCG TGCCGCTGAA CTACATCGTG
CCGGCGCAGG CATTCGAGAT CGTGCTGAAC ATGGCGTCGC TCGGGATCAT CACGACCTGG
GGCTTCATCG TGATGTGCCA GATCCTGTTC CGCCGCGCGG TCAATCGCGG CGAGTTGAGC
CCCGTGTCGT TCCGGATGCC TGGCGCACCG TTCACGTCGT GGCTCACGCT CGGGTTTCTC
GTCAGCGTGC TGGTGTTGAT GGCGTTCGAT TACCCGGGCG GCACGTGGAC CGTCGGGATG
ATTCCGGTGG TCGTGCTCGC GCTGGTGATC GGCTGGAAGC TCGCGAAGCG CGGTACCGCG
CGACAGCAGG CAAGCGCCGC GCCGGCCATC GCCGATCCGG CCAGCAACGT CTGA
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| Protein sequence | MKHVSERPAD TAGGADPRHA ERDAMFASHE AGYAKQLKPR HVQMIAMGGA IGTGLFLGAG
GRLQSAGPAL AVVYLVCGVF AFLIMRALGE LVMHRPTSGA FVSYAREFMG ERASFVAGWM
YYLNWATTGI VDITAVAIYM KYWAAFSDVP QWVFALGALG IVSVMNMIGV KVFGEMEFWF
SIVKVGTLAL FLGVGAVFLA SGHPVAGQMP GLHLIADHGG IFPHGILPAV LIVQGVVFAY
ASIELVGVAA GETADARKVL PKAINSVMWR IALFYVGSVV LLTMLLPWTA YSAHESPFVT
FFSKLGVPYV GTVMNVVVLT AALSSLNSGL YSTGRVLRSL AMGGSAPRFV SRMNARGVPY
GGILVTVAVN AIGVPLNYIV PAQAFEIVLN MASLGIITTW GFIVMCQILF RRAVNRGELS
PVSFRMPGAP FTSWLTLGFL VSVLVLMAFD YPGGTWTVGM IPVVVLALVI GWKLAKRGTA
RQQASAAPAI ADPASNV
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