Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1317 |
Symbol | |
ID | 4309026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1443890 |
End bp | 1445251 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638149126 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_773209 |
Protein GI | 115351370 |
COG category | [S] Function unknown |
COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGCGC GCATCACGCA GCGCACGCCG GGCCTGCGCA CGGCGGCACT GCGCGCGGCG TGCGTGGTCG CGCTGGCATG CGCGGCACAG CAGGCCGCCG CGCGGCCGCC GGCTGCCGCG GGCAAGACGA TCGTCTACCG CACGCAAGCC GGCGACACGC TGTACGACGT CGCCGCGCGC TACCTGCAGG GCCCGGACGA CTGGCAGCTG CTGCAGCAGA TCAACGGCGT ACCCGCCCCG AAGCACCTGC AGCCCGGCAT CGCGCTGAAG CTGCCGGTCG CGCGGCTGCG CAAGGAAAAG CTGACCGCGC GCGTCGTCGC GGTGCAGGGT GCGGCCGAGC GCACGTCCGG CGACGCCTAC GCGCCGCTCG CCGACGATGC GACGCTCAAC GAGGGCGACC GCGTGCGTAC CGGCGCGAAC GGTTTCGTGA CGATCGAGCT CACCGACGGC ACGCACATGA GCCTGCCGCC CGACAGCCAG CTCGACCTGA AGACGCTGCG CCGCACCGTG CTGACCGGCA CGCTCGATCG CGAGTTCGAG CTCACGCGCG GCTCGGTCGA CAGCGAAGTC ACGCATCTGA AGAAACGCGA CGACCGCTTC CAGATCCGCT CGCCGTCGGT CGTGGCCGGC GTGCGCGGCA CGCGTTTTCG CGTGAACTAC GACGCGGCCG GCAACGCGGC GACGCGCGTC GAAGTGCTCG ACGGCACCGT CGGCGTCGCG GGCAAGCGGC AACCGGCCGA CCCGACGCTC GTGCATGCGA ACTTCGGCAG CGTCGCGACG TCGTCCGGCG CGATCGGCGC GCCCGTCGAG CTGCTGCCCG CACCGGCGCT CACGCATCCG GACAAGGTGC AGGACGAGCC CGACGTCGCG TTCGACATCG CGCCGCTCGC CGACGCGCAC GCATACCACC TGCAGCTCGC GCACGACGCG GGCATGCTCG ACCTGTTCCG CGAAACCCGC ACCGATACGC CGAGCGCGGT GTTTCGCGAC GTGCCGAACG GCACGTATTT CGTGCGGGTC GCCGCGATCG ACACCAACGG CCTCGAAGGC ATGCCGCGCA CCTATGCGTT CGAGCGGCGC CAGATGGGGC TCGACGCGAG CGCGTCGCCC GGCGCCGGCG GCTACGAGTT CCGCTGGTCG CCCAACGGCT CCGGCAAGGA TGCGCGCTAC CGGTTCGTGC TGTCGCGCTC GAAGGACCTG AGCGCGCCGG TCGTCGACCA GGTCGGCCTG CACGCGCGCA AGATCACCGT CGCGCACCTG CCGCCCGGCG ACTACTACTG GGCGGTGACG GTCGAGGAGT TCGAAGGCGG CAAGTTCTAC CAGAAGACGA GTCCGGTCAG CGCGTTCACG TTGTCGCGCT GA
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Protein sequence | MIARITQRTP GLRTAALRAA CVVALACAAQ QAAARPPAAA GKTIVYRTQA GDTLYDVAAR YLQGPDDWQL LQQINGVPAP KHLQPGIALK LPVARLRKEK LTARVVAVQG AAERTSGDAY APLADDATLN EGDRVRTGAN GFVTIELTDG THMSLPPDSQ LDLKTLRRTV LTGTLDREFE LTRGSVDSEV THLKKRDDRF QIRSPSVVAG VRGTRFRVNY DAAGNAATRV EVLDGTVGVA GKRQPADPTL VHANFGSVAT SSGAIGAPVE LLPAPALTHP DKVQDEPDVA FDIAPLADAH AYHLQLAHDA GMLDLFRETR TDTPSAVFRD VPNGTYFVRV AAIDTNGLEG MPRTYAFERR QMGLDASASP GAGGYEFRWS PNGSGKDARY RFVLSRSKDL SAPVVDQVGL HARKITVAHL PPGDYYWAVT VEEFEGGKFY QKTSPVSAFT LSR
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