Gene Bamb_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0679 
Symbol 
ID4308556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp759824 
End bp760273 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID638148474 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_772572 
Protein GI115350733 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.57915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA GTCCCATTCG ATCCAGCATG CGCGGCGGCC GCTCGCGCCG CGCGATGGCC 
GACATCAACG TCGTGCCGTA CATCGACGTG ATGCTGGTGC TGCTCGTGAT CTTCATGGTC 
ACGGCACCCC TCGTGGCCCC GTCGATCATC AATCTGCCGA CCGTCGGCAA TGCGGCGCCG 
CAGGAACAGA CGCCGCCCGT CGTCGTCAAC ATCAAGGCCG ACCGCACGAT GAGCGTCAAG 
TACAAGGGCG ACTCCGGCGC GACGCAGGAA GACACGATGA CCAAGGCCGA GCTCGACAGC 
TTCATGTCGG CCCGGCAGGC CGATCATCCC GACCAGCCGG TCGTGATCGC GGCCGACAAG 
ACCGTGCAGT ACGATGCGGT CATGACCGTG ATGTCGGATC TGAAGGCGCG CGGCGTCAAG 
CGCGTCGGCC TCCTCGTCAA ATCGCAATGA
 
Protein sequence
MAGSPIRSSM RGGRSRRAMA DINVVPYIDV MLVLLVIFMV TAPLVAPSII NLPTVGNAAP 
QEQTPPVVVN IKADRTMSVK YKGDSGATQE DTMTKAELDS FMSARQADHP DQPVVIAADK 
TVQYDAVMTV MSDLKARGVK RVGLLVKSQ