Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0121 |
Symbol | |
ID | 4308595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 140809 |
End bp | 141699 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638147899 |
Product | LysR family transcriptional regulator |
Protein accession | YP_772016 |
Protein GI | 115350177 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.92229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATGG AAAACCTGAA CGGCATCGCC GCGTTCGTCC GCACCGCCGA GGCGCTCAGC TTCGTCGCGG CCGGCCGTGC GCTCGGCATT TCCGCGTCCG CCGTCGGCAA GACGATCGCG CGGCTCGAGC AGTCGCTCGG CGTGCGCCTG TTCAACCGCA CGACCCGGCG CGTCACGCTG ACCGACGAAG GGCGCCATTT CTACGAACGC TGCCAGCGGA TTCTCGAGGA TTTTCGCGAT GCGGAAGCGA CCGTGACGGC CTCCGCGCAG CACCCACGCG GCAAGCTGCG CGTGAGCCTG CCGGTGATCG GCTACCGGTT CCTGCTGCCG GTGCTGCCCG AATTCAGGCA GCGCTATCCG GACGTCGAGC TCGACCTGGA TTTCAACGAC CGGATGGTGG ACGTCGTCGA AGGCGGTTTC GACGCGGTGA TCCGCAGCGG TCCGCTGTCG GATTCGAGCC TGATGTCGCG GCGGCTCGGC CCGTTCGCGT TCGTGCTGTG CGCGACGCCC GCGTATCTCG CGCAGGCCGG CACGCCGCGC GCGCCGCACG ATCTCGAAGC GCACGATTGC GTGCGCTACT GCTTCCCGAC CACCGGCAAG CTGCAGGACT GGGCGCTCGC CGCCGCCGAC GGCACGCCGC TTAAGCTGCG CACCGCGATG ACCTGCAACA ACATGGAAGC GCTGCGCGGC GCGGTCATGG CTGGGCTCGG CATCGGCTAC ATGCCCGACT TCCTCGCGCG CGACGCGCTG GACACCGGCG CGCTCGTCAC CGTGCTCGAC GACTACCGGA TCGCGCCGGG GCAGTTCTCG ATCGTGTGGC CGTCGAGCCG GCAGTTGTCG CCGAAGCTGC GCGTGTTCGT CGACTTCCTG TGCGAGCGGC TGTTCAAGTA G
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Protein sequence | MSMENLNGIA AFVRTAEALS FVAAGRALGI SASAVGKTIA RLEQSLGVRL FNRTTRRVTL TDEGRHFYER CQRILEDFRD AEATVTASAQ HPRGKLRVSL PVIGYRFLLP VLPEFRQRYP DVELDLDFND RMVDVVEGGF DAVIRSGPLS DSSLMSRRLG PFAFVLCATP AYLAQAGTPR APHDLEAHDC VRYCFPTTGK LQDWALAAAD GTPLKLRTAM TCNNMEALRG AVMAGLGIGY MPDFLARDAL DTGALVTVLD DYRIAPGQFS IVWPSSRQLS PKLRVFVDFL CERLFK
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