Gene Mmar10_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2220 
Symbol 
ID4285082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2423308 
End bp2423769 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID638141722 
Producthypothetical protein 
Protein accessionYP_757450 
Protein GI114570770 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0134246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGT TGCTGTCGGT CTTTGACCGC ATGAATCTCT GGGCCTGGTG GGCCGTCTCC 
GGCGTGATTC TCATCGCCGA GCTGCTCACC GGCACGACAT ATCTGCTGTG GCCGGCGGCT
GCGGCCTTCC TGACCGGTTT CGTGGCTTTG GAAGTGCTCG GTGTCAGCTG GCCGGTTCAA
CTGGCCGTAT TTGCCCTGCT GTCCTTCGTT CTTCTGTGGA TCGGCGACCG CTGGGTACGC
CCGTCCATGC GGGCCGGCGC TGGCAGCGGG CTGAATGACC GATCAGCCCG CATGGTCGGG
CAGCGGGTCC AGGTTGTCGC TGACTTTTCC TCGGGCCGCG GACGGGTTCG CTATGGCGAC
AGTGAATGGG CCGCCGAAAC GACAGACGGA ACAAATCCGG TGGCCGGATC GACCCTGAAG
GTTGAAGCAA TCAACGGCGT CATCCTGACC ATTGTTTCGT AA
 
Protein sequence
MEMLLSVFDR MNLWAWWAVS GVILIAELLT GTTYLLWPAA AAFLTGFVAL EVLGVSWPVQ 
LAVFALLSFV LLWIGDRWVR PSMRAGAGSG LNDRSARMVG QRVQVVADFS SGRGRVRYGD
SEWAAETTDG TNPVAGSTLK VEAINGVILT IVS