Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1899 |
Symbol | |
ID | 4286417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 2076220 |
End bp | 2077875 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638141399 |
Product | protein-export membrane protein SecD |
Protein accession | YP_757129 |
Protein GI | 114570449 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.680962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.478196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATT TCGGGCGTTG GAAACTGCTT TCCATATTCC TCATCACGCT GCTCGGCGTG ATGTACACCA TTCCCAATTT CGTGCCGGAA GAAGACCGGT TCACGATCAA TGAGGTGGAT GGTACGGCGA CGCCCAAGGG CATCTGGCGT TTCATCCCGG CCGGGACGAT CAATCTGGGC CTCGACCTGC AGGGCGGTTC GCACATCGTC TTTGAGGTCG ACATGGACGA GGTGCGCGAC GCCCAGCTGG AAACGCTGGC CTCCGACATC CGCACCACGC TGCGCGATGC GCCGCCGGTT CTGGCCCGCT CGGTCGCTGT AATCGGGGAT GAAGTCGTCG TTCTGCTGGT CCGCCCGGAA GAGCGCGATA CTGCGCTGGA GCGGATCCGT GAGCTCAATG CGCCGGTCAC CACCGGGATC GGTCAGGTCG GTCTGTCCAA CATGTATGAT ATCGGTGCGG ACCCGTCTGA CCCGTCGGCG ATCCGGATCT CGGTGACCTC GCAGCAGTAT GAATCCATCC GCAACCGCAC ACTGGAACAG TCGATCACGG TGATCCGTCG CCGTCTCGAC GGGCTGGGCA CCACCGACCC GACCATCGCC CGCTCCGGCG ACCGCCGGGT CCTGGTGCAG GTGCCGGGTG CCGATGATCC GCAGGAGATC ATCGACCTGG TCGGAACACA GGCGGCGATG AGCTTCCACA TGGTCGACGA GAATGTCGAT CCGGGCCCCA ATGGCCAGGC ACGTACACCG CCGGGCGTGA CGGTCTATCC GATGGCCGAT ACCGGCGGCA CCCAATGGCT GGCCGTCGAG ACACGCCAGC GCCTGACCGG TGAGAACCTC AACAGTTCCA ATGTCACAAC CCATCCGAGC TATGTGGGAC CCGTGGTCGG CTTCCGGCTC GACACGCAGG GCGCCCTGAT TTTCGGCGAG CTGACCCGGG CCAATCGTGG CCGTCGTTTT GCCATTGTGC TCGACAATGA AATCATCACC GCACCGACGA TCAACGAACC GATCCTGTCA GGGTCCGGGG TGATCGGCGG CAGCTACACC TATGAGACGG CCAACCAGCT CGTGATCCTG CTCAATGCCG GTGCCCTGCC GGCCTCGCTG ACGCCGGTCG AGCAACGGGT CGTTACCGGT ACGCTGGGTC AGGACCAGGT GGAAAGCGGC AAGCTGGCCA TCATGATCGG TTTCGCCCTG GTCATCGTCT TCATGGTTGC CATGTATGGC GTGTTCGGCC TGTTCTCGAC CATGGCGCTT CTGGTCAATG TCGTCCTCAT CCTGGGCGGC CTGTCGGGGC TTGGCATGAC GCTGACCCTG CCGGGTATTG CCGGTATCAT CCTGACGATC GGCATGGCGG TGGACGCCAA TGTGCTGATC TATGAGCGGA TCCGCGAGGA GGTGTTGAAC AATCGCACCC CGGTGCAGGC TCTACAGGCT GGCTACGAGC GAGCCTTGGC GGCCATTCTC GACGCCAATA TCACCACCTT CATCGCTGCT GCCGTGCTCT ACATGCTCGG TGCCGGTCCG GTGCGGGGTT TCGCGGTGAC GCTGGGTATC GGCATCATCA CCTCGGTCTT TACGGCCTTC GTCGTCTCCC GCCTCCTGGC GGTTCTCTGG TTGCGGGCGT TCAAGCCCAA AAAGCTGCCG CTTTAA
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Protein sequence | MLHFGRWKLL SIFLITLLGV MYTIPNFVPE EDRFTINEVD GTATPKGIWR FIPAGTINLG LDLQGGSHIV FEVDMDEVRD AQLETLASDI RTTLRDAPPV LARSVAVIGD EVVVLLVRPE ERDTALERIR ELNAPVTTGI GQVGLSNMYD IGADPSDPSA IRISVTSQQY ESIRNRTLEQ SITVIRRRLD GLGTTDPTIA RSGDRRVLVQ VPGADDPQEI IDLVGTQAAM SFHMVDENVD PGPNGQARTP PGVTVYPMAD TGGTQWLAVE TRQRLTGENL NSSNVTTHPS YVGPVVGFRL DTQGALIFGE LTRANRGRRF AIVLDNEIIT APTINEPILS GSGVIGGSYT YETANQLVIL LNAGALPASL TPVEQRVVTG TLGQDQVESG KLAIMIGFAL VIVFMVAMYG VFGLFSTMAL LVNVVLILGG LSGLGMTLTL PGIAGIILTI GMAVDANVLI YERIREEVLN NRTPVQALQA GYERALAAIL DANITTFIAA AVLYMLGAGP VRGFAVTLGI GIITSVFTAF VVSRLLAVLW LRAFKPKKLP L
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