| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1512 |
|---|
| Symbol | |
|---|
| ID | 4286818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 1665159 |
|---|
| End bp | 1666082 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638140998 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_756742 |
|---|
| Protein GI | 114570062 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.607249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.542943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGGT CCGCTATAGC CTTCGACTGG AATCAGATCC GCGCGCTCCT CGCCACCATT
GAGGAAGGCT CCTTTTCCGG TGCCGCCCGC GCCCTGGGCC AGACCCAGCC TACACTGAGC
CGGCAGATCG CCGCGCTGGA ATCAGACCTC GGCGTCACCC TGTTCGAACG CAATCGCCGC
GCCACCGTGC CGACGGGTGC TGCCCTGGAA CTGGTCGAAC ATGTCCGGTC CATGGGTGAA
GCGGCACAAC GGATATCCCT GACCGCCTCC GGCCAGTCCA GCGCCATCGA GGGTCGGGTG
ACAGTGACCG CGACCAATAT CATGGCCTCC TACTACCTGC CGCCCATCAT CAAGCATATC
CGCGAGACAG CGCCGGGCAT CCGGCTGGAA ATCATCGCCT CGAACGAGCT GCAGGACCTG
CAAAAGCGCG AGGCCGACAT CGCCATCCGG CATGCGCGTC CGGAACAACC CGACCTGATC
GCGCGCCTGG TCGGCGAAAC AACCGGCCAT CTCTACGCCC ATCCGGATTA TCTCGACCGG
GTCGGCCGTC CGACCTGTAT CGAGGACATC AACCGGCTGG ATTTCATCGG GTTCGAGCAG
AATGAGCGCG TCATCGAACA TCTCAACGCG ATCGGCCTGA ACCTCACCGC CGACAATTTC
CGCATCAGCT GCGGCAGCAG CACCGTGCAC CATGCGCTGG CAATGCAGGG GCTCGGTGTC
ACCCCGATGA CGCGCGACTG GATCGAACAG CATTCAGAGC TGGAAGAATT GTGGCCGGCA
CTGCCTCCCA TTCCCGTCCA GACCTGGCTG GTCACTCACC GGGAACTGAA TACCAGTCGC
CGAATACGGC TGGTCTTCGA CGCGATCGCC GACGGGCTGG ACCAGCAACG CCGCGAAACG
CGCAACCGCG TAACGGCGAT CTAG
|
|---|
| Protein sequence | MNWSAIAFDW NQIRALLATI EEGSFSGAAR ALGQTQPTLS RQIAALESDL GVTLFERNRR
ATVPTGAALE LVEHVRSMGE AAQRISLTAS GQSSAIEGRV TVTATNIMAS YYLPPIIKHI
RETAPGIRLE IIASNELQDL QKREADIAIR HARPEQPDLI ARLVGETTGH LYAHPDYLDR
VGRPTCIEDI NRLDFIGFEQ NERVIEHLNA IGLNLTADNF RISCGSSTVH HALAMQGLGV
TPMTRDWIEQ HSELEELWPA LPPIPVQTWL VTHRELNTSR RIRLVFDAIA DGLDQQRRET
RNRVTAI
|
|---|
| |