Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1329 |
Symbol | |
ID | 4286898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 1451939 |
End bp | 1455115 |
Gene Length | 3177 bp |
Protein Length | 1058 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638140808 |
Product | outer membrane autotransporter |
Protein accession | YP_756559 |
Protein GI | 114569879 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0892684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.563685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCC GTTTCTTGTT CGCCAGCGCC CTTGTTTCGC TGACCGTTAC AGCTCCTGCC GCTTTTGCAG ATCGCGAAAT CACGGACGAG ATCACCACCC CGATCGCAAC GTCTACGGCA GGCGATGGCG GCGTTCCCGA CAACATCGTC ATCTCGGCAG GCGGCCGCGT TACCCTGGTT CCGGGCGCCA CGGCGGTCAC CATCGACAGT GATAACGACG TGACCAACAG CGGCAGCATC ATCCTCGAAG GCGATGATGA TGGCGGTGTC GGCATTCACG CGATCGGCGG CAATTCCGGT ACGATCACCC ATTCCGGCCT GATCCAGGTC CTGGCCGAGA CCCGCGCCGG CGATACGGAC GACCCTGCGG ACGGCATGGT CGACGGGCCG CTTGCCGTCG GGTCGAACCG TGTCGCAATC CTTGTCGATG GCAACGCCGT GTTCACCGGC GACATCATCG CCACCGCCGG CAGCACGATG ACGGTGATCG GCAATGATTC GGCGGGTCTG CGCGTGCTGA CGGGTCTGGA CGGAAATATC GACCTGGCCG GCAATGTTCG CGCCATCGGT GACAACAGCT TCGGGGTCGA AATCCGAGGC CATGTCACCG GCGATGTCGA AATCGACGGC CGGGTGGAGA TCCAAGGTGA AGACAGCGGC AGCATTCTCA TCGCCAGCGA TGTGGATGGC GGTGTGAGTA TCGGCGCGAC CGTGACCGCA ACAGCCTATC GCTTTGTCGG ACGTCCGGGC GAGGAAGCGC GCGCCAGTCT TGAAGCCGAA GACACAGGCC AGAGCGGGTC CCCTGTCCTC ATAAATGGCA ATATCGGCGG CGGCGTCTTC TTCAGTGGCT ATTCCGCGGA TCGCCCGAGC ACCCCGTCAA CGAGCATTAC AGTACGCGGT TCGGCTCCGG CCGCCCATAT CCTTGCCAAT GCGAGCTCCG GGGACATTGT TCTCGGTGAA GTCGTGCTGG AAGCGATTGC CGATGACCCG GATACAGCCG ATGTCGACGA AAGCGTCGCT GCCGAGTTGA TCGGCTACGC TCTCGTCAAC CGTGGAGCCA TCAATGCCCA GGGCAATCTG GACGGCATCG ACACGATCGG GCTGCAAGTC AGCGGCGCGG ACGGACACAC GGTCAGCCTG ACCGGCGGCT TTCTGAATGA CGGCAATATC GGTGGTTCCG CCTGGTCCGC CACATCCACC GGTGTGGTCA TGGGTATGGG CGCGATTGTA CCAACCTTTG CCAATACCGG GGACATTCTG GTCCGGACCA ATGGTGAAGG GGCTCTCGCC CGCGGTGTTT ACATCGATAC CGGCGCCAGC GTGCCAATGC TGGTCAACTC CGGCATCATC GACGCCACGT CCCTGAACGG GGGCGGCGCC GTCGCACTGA CCGACCTGTC AAACTCGCTG ACGATGATTG AGAACACCGG TGAGATTGCG GCCTACCATC TGAACTCTGT GGTCGGCACC GATCCGCAGG TTGATGACCT TGTCGCGATC GACCTGTCAG CGAACACGAT TGGCACGACC ATCCGTCAGT ATCGCGCCGC CGATGCTGCA GACGATCATG TCGAGGAGAT CATCGGTGAA GTCCGCCTCG GATCGGGTGA TGATGTCCTC CAGATTGAGT CGGGCGTCGT GACCGGCGAC ATCGCTTTCG GCGACGGTGC TGATCAACTC ATGATCACTG GCGGTATCGT GACCGGCGGG CTGACTGACT CCGACGGCAA TCTTGTGGTT GAAGTTGATG GGGCCCAGCT GTCCCTCGGT GCCAATACAA GCGCCAACAT CACAACCGCC CGCTTCGGTG ATGGCTCGGT GATCCGATTC CAGATCGATG ATGAGAGCGG TACCGCCGCG AACATTACGG CTTCGGGTGA CATCACCTTC CAGTCCGGTT CCCGCGTTGC TGCGACCTTG GCCAATCTGA TCGGTGACGG TGCAACCTTT GTGGTGGTCT CCGCCAATAA TCTGGTGATC GAAGAAAGCC TGGATATTCT CCAGGACACG GAAGCACCCT GGCTCTATGA GTCCAATCTG GAGTTCGATC CGAACAATGC CAACGCACTG ATTCTCACGC TGCGTCGCCG CACTGCGGAC GAGTTGGGGA TGAATGCGAA CCAGGGCGCG GCCTATACCG CAGCGCTCGA AGGGTGGCAG AACAATGATG AACTCGGTCA GGCCATCGCG TCCTTGCTGA CCCAGGACGA GTTCTTCGCG GCTTATGATC AGCTTCTGCC GGAATACTCC GCAAGTGCCA TTCAATTTGC TCTTGCGGCC AATGACAGTG CGGTCGGCGC CCTCGCCAAC CGCCTCGAGG CCGTTCGTCG CAGTCCTGAA GAGTCCGGTG GTCTCTGGGT TCAGGAATTC GGCTATTTCG CGGATCGGGC AGGAAGCGCA TTTGGTCCGG GCTATCGTGG ACATGGTATC GGCGTCGCCG TCGGCTTCGA CCGCCCGGTC GGGCCGTTCT ACGCCGTTGG TCTGAATGTG GTTGGCGCGG CGAGTGAAGT CTCGGAAGTC AATGGTGTTG ACGAGCCGAT GAGTGCCATC ACGGCCCAGA TCGGCTCCTA TGCTGGCGCC CGTTTCGGGA CGTTTGATTT CGATGTTTAC GGAGCTGTTG GCTATGACAG CTTCGAGCAC AATCGCCGGG TCCTCATTGG CGCCTTTGAC GCCTCACCTA CCGCAGACTG GACGGGTTGG CACACCTCGG CCTCGGCCCG GATCGCACGC GACATAGCCG TTGGCGACAG CTGGTTTGTC CGCCCGGCAT TCTCGGTCGA CTATTTGCGC CTGTCCGAAA GCGGATATAC CGAAACCGGC GGCGGTGTCG GTGTTGATCT GACGGTCGAT GATCGTGAGA CGTCGAGCTT CTCCGGGACC GGCCTTCTGA CCCTTGGCGC CCGCTTCGAG AACACCAATA GTTGGTGGTC GCCGAGTGTG CGCGTCGGTT TCCGCAACGA GTTCGGCGGT GGCGAATCGG AAACGGACGC TAGCTTCGCT GACTTCGACG ACACCTTTAC CCTGCGCTCG CAGTCAATGC CTGGCACTGG CGGGATATTC GGCTTCGGAA TCGCAGCCGG TTCGGGTTAT TCGACCTTCT CATTCGATTA TGATGCCGAT GTGCGCGAGG ACTTCATTCG CCACACTGCC CGCCTCGTTA TGCGGATGGT CTTCTAG
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Protein sequence | MRRRFLFASA LVSLTVTAPA AFADREITDE ITTPIATSTA GDGGVPDNIV ISAGGRVTLV PGATAVTIDS DNDVTNSGSI ILEGDDDGGV GIHAIGGNSG TITHSGLIQV LAETRAGDTD DPADGMVDGP LAVGSNRVAI LVDGNAVFTG DIIATAGSTM TVIGNDSAGL RVLTGLDGNI DLAGNVRAIG DNSFGVEIRG HVTGDVEIDG RVEIQGEDSG SILIASDVDG GVSIGATVTA TAYRFVGRPG EEARASLEAE DTGQSGSPVL INGNIGGGVF FSGYSADRPS TPSTSITVRG SAPAAHILAN ASSGDIVLGE VVLEAIADDP DTADVDESVA AELIGYALVN RGAINAQGNL DGIDTIGLQV SGADGHTVSL TGGFLNDGNI GGSAWSATST GVVMGMGAIV PTFANTGDIL VRTNGEGALA RGVYIDTGAS VPMLVNSGII DATSLNGGGA VALTDLSNSL TMIENTGEIA AYHLNSVVGT DPQVDDLVAI DLSANTIGTT IRQYRAADAA DDHVEEIIGE VRLGSGDDVL QIESGVVTGD IAFGDGADQL MITGGIVTGG LTDSDGNLVV EVDGAQLSLG ANTSANITTA RFGDGSVIRF QIDDESGTAA NITASGDITF QSGSRVAATL ANLIGDGATF VVVSANNLVI EESLDILQDT EAPWLYESNL EFDPNNANAL ILTLRRRTAD ELGMNANQGA AYTAALEGWQ NNDELGQAIA SLLTQDEFFA AYDQLLPEYS ASAIQFALAA NDSAVGALAN RLEAVRRSPE ESGGLWVQEF GYFADRAGSA FGPGYRGHGI GVAVGFDRPV GPFYAVGLNV VGAASEVSEV NGVDEPMSAI TAQIGSYAGA RFGTFDFDVY GAVGYDSFEH NRRVLIGAFD ASPTADWTGW HTSASARIAR DIAVGDSWFV RPAFSVDYLR LSESGYTETG GGVGVDLTVD DRETSSFSGT GLLTLGARFE NTNSWWSPSV RVGFRNEFGG GESETDASFA DFDDTFTLRS QSMPGTGGIF GFGIAAGSGY STFSFDYDAD VREDFIRHTA RLVMRMVF
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