Gene Swol_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2488 
Symbol 
ID4282652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2823944 
End bp2825980 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content48% 
IMG OID638139373 
ProductATP-dependent Lon protease 
Protein accessionYP_755148 
Protein GI114567994 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4930] Predicted ATP-dependent Lon-type protease 
TIGRFAM ID[TIGR02688] conserved hypothetical protein TIGR02688
[TIGR02653] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGT CGTATTTGGA TGCCAAACTG AATCGGCATT TTGCGGGCCG GGTAGTTCGC 
AAAGACCTGA CCGGGATGAT TAAACAGGGA GCAAACGTTC CTACTTACGT TTTAGAATAT
CTCCTGGGGA TGTACTGTGC CACCGATGAT GAAGAAGCTA TCCATGATGG GGTGGAGCGG
GTTAAAAAAA TCCTGGCGGA TAACTTCGTC CGTCCTGATG AAGCGGAAAA AGTTAAATCA
CGTATTAAAG AATTGGGTCA GTATACGGTA ATTGATAAAT TAACCGTAAA ACTCAACGAA
AAGCGTGATA TCTATGAAGC CGAGTTTTCC AACCTGGGTA TTAAAGGGGT AGCGGTCAGC
TCCGAGTATG TAAAAAAGTA CGAGAAGCTA TTAGCGGGTG GCATTTGGGC GATTCTTAAA
ATGGAGTATT TCTATGATGA GGAAAACCGG CACAATAATC CCTTCAGCAT TGTAAGCTTG
AAACCCATTC AGATGCCCAA CATGGATTTA AATGAGATAA AGGTAGGACG CAAGCAGTTT
ACCAAAGACG AATGGATAGA TCTGCTGATT CGTTCCACCG GCCTGGAGCC AACTCAGTTA
GAACCGGTGG TGAAGTGGCA TTTGCTGCTG CGGTTGGTGC CGCTGGTGGA AAATAATTAT
AACCTGTGTG AACTGGGGCC GCGGGGAACC GGCAAATCCC ATGTTTATAA GGAGATTTCC
CCCAACTCAA TATTGGTCTC CGGGGGGCAG ACTACGGTGG CCAATCTATT TTATAATATG
TCCACCCGTT CGATTGGATT AGTCGGCTTA TGGGATTGTG TGGCCTTTGA CGAAGTGGCC
GGGATTCACT TTAAAGATAA AGACGGCATC CAGATTATGA AGGATTACAT GGCTTCGGCC
TCTTTTGCCC GCGGCAAAGA AGAGAAAAAC GCCAATGCCT CCATGGTCTT CGTGGGTAAT
ATCAACGAGA GCCTGGATTT CTTGTTAAAA ACCTCGCACC TGTTTGCTCC CTTCCCGGAA
GGAATGGCCA ATGACAGTGC TTTTTTTGAC CGCATGCACT ACTATTTGCC TGGTTGGGAG
ATTCCTAAAA TGCGTCCCGA GCTGATTACC CATAATTATG GATTTATTGT GGATTATCTG
GCCGAGTACC TGCGGGAGAT GAGAAAACAG AGCTTTGCGG ATGCCATTGA CCGCTATTTT
AAGCTGGGGA ATAACCTTAA CCAGCGGGAT GTTATTGCCG TTCGCAAAAC TGTATCGGGA
ATGATGAAAC TACTCTATCC CCACGGAGAA TATACCTGTG ATGATGTAGC TGAAATCCTG
GAATATGCCC TGGTGGGCCG CCGCCGGGTA AAAGAGCAAC TCAAGAAAAT CGGGGGTATG
GAATTTTATG ATGTGCATTT CTCTTACATT GACCGGGAAA CCCTGGAGGA GAAATTCGTT
TCCGTCCCCG AGCAGGGAGG GGGAAAACTT ATTCCGGAAG GGCTGGGCAA ACCTGGTCAT
GTTTATCTGA TAGGCAAGGG CGACTCCGGG ATGATAGGGG TCTTCAAACT GGAGAATCAG
GCCGTATCCG GAACTGGCAA ATTTGAAAGA ACCGGTCTGG GCTCCCGTAA AGAGGTAAAA
GAAAGTATCG ACACCGCTTT CCGCTACTTC ACGGCCAATT GTAAAAATGT CAGCAGCGGT
ATCACCACCA AAAACAAAGA CTACCTTATG CATGCCACCG ACCTGCAGGG TATCGGTATG
AATGCAGAAT TAGCCCTGGC CGAGTTTATC GGCCTTTGCT CATCCGCCCT GGACCGACCG
GTACAGGAAA GCCTGGTGGT ATTGGGCAAT ATCACCGTTT CCGGCACCAT TGAAAAAATC
TCCGATTTCG CCAATGTGCT GCAGGTCTGT GTAGATGCTG GTGCCAAACG CGTACTTATC
CCGGCCGTAT CAGTAGTTGA CCTCCAGAAT GTCCCCCCGG AACTGCTGAT TAAAGTACAA
CCAATCTTCT ATTCCGATCC CATTGATGCG GTGTTCAAGG CGTTAGGGGC GGTGTAG
 
Protein sequence
METSYLDAKL NRHFAGRVVR KDLTGMIKQG ANVPTYVLEY LLGMYCATDD EEAIHDGVER 
VKKILADNFV RPDEAEKVKS RIKELGQYTV IDKLTVKLNE KRDIYEAEFS NLGIKGVAVS
SEYVKKYEKL LAGGIWAILK MEYFYDEENR HNNPFSIVSL KPIQMPNMDL NEIKVGRKQF
TKDEWIDLLI RSTGLEPTQL EPVVKWHLLL RLVPLVENNY NLCELGPRGT GKSHVYKEIS
PNSILVSGGQ TTVANLFYNM STRSIGLVGL WDCVAFDEVA GIHFKDKDGI QIMKDYMASA
SFARGKEEKN ANASMVFVGN INESLDFLLK TSHLFAPFPE GMANDSAFFD RMHYYLPGWE
IPKMRPELIT HNYGFIVDYL AEYLREMRKQ SFADAIDRYF KLGNNLNQRD VIAVRKTVSG
MMKLLYPHGE YTCDDVAEIL EYALVGRRRV KEQLKKIGGM EFYDVHFSYI DRETLEEKFV
SVPEQGGGKL IPEGLGKPGH VYLIGKGDSG MIGVFKLENQ AVSGTGKFER TGLGSRKEVK
ESIDTAFRYF TANCKNVSSG ITTKNKDYLM HATDLQGIGM NAELALAEFI GLCSSALDRP
VQESLVVLGN ITVSGTIEKI SDFANVLQVC VDAGAKRVLI PAVSVVDLQN VPPELLIKVQ
PIFYSDPIDA VFKALGAV