Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1581 |
Symbol | |
ID | 4282185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1800948 |
End bp | 1801973 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638138460 |
Product | heat-inducible transcription repressor HrcA |
Protein accession | YP_754254 |
Protein GI | 114567100 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00115825 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTGG ATGAAAGAAA AAGGAATATC CTGGGATCCA TTATCCGTGA CTATGTGGAA ACGGCTGAAC CGGTAGGTTC CCGGGCTATG GTAAAAAAGC ATGATTTAAA AATAAGCGCA GCGACAGTAA GAAATGAAAT GGCCGATCTT GAAGACATGG GCTACCTGGA GCAGCCGCAC ACCTCCGCAG GTCGTATCCC TTCCGAAAGA GGCTTTCGTT ATTATGTGGA TTGCATGATG GAAAAAGAGC CTCCCGGAGA GAGGGAATAC GCTTTATTGC AGCAATTATT TGAACAGAAT ATAGAAGACT GGGAGCAGGT GATTTTAGGG ATTGCTCATT TTCTATCCCA GATGACCCGC TATACTTCCT TTGTTATTGT TCCAGCAGTG AAATTCACTG AGTTTCGCAA CCTGCAACTG CTTCCTCTGG ATCAAGGAAA AGCCCTGCTC TTGTTGGTAT GTGATATGGG GGTAATAATG CATCGTATAA TTAGTATCCC TGAATTCATA TCATCCCAGG ATTTGCAGGC TATTACCGGC TTGTTTAACC AGGCCTTCAT AGGCAAGCGA CTGGAGGAAG TAAAAAGAAG CGATTTGCAA CTCATAAGGG AGAACCTCAG CCAGCGCCGT CAAATTATTG ATAATGCCCT GGAAGCTATA GATAACCTGT TGCAAAACTC CCGCGATGAA AAAGTAATGG TCAGCGGAGC CCTCAATATA CTTAATGAAC CTGAGTTTAA AGATATGGAT AAACTAAAAC GAATACTGAA TGTTTTGGAA GAAGACGATT CGCTGCGACA GATTATTCCC GGGGAACTGG GAGAGGCAGT TGACATTAAG ATTGGCCGGG AGAACCCGTT GGAAGAAATC AAGGAAATGA GTCTGGTGGT AGCAGGGTAT AAGTCTTTTG GCGAGCTGGG TAAGATAGGA GTGATAGGCC CGGTGCGTAT GGAATACTGG AAAGCCGTAG GTACGGTGGA AACGGTGCGG GATATTATAG AAGACTATCT TAAGGGCTTA GGCTAG
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Protein sequence | MTLDERKRNI LGSIIRDYVE TAEPVGSRAM VKKHDLKISA ATVRNEMADL EDMGYLEQPH TSAGRIPSER GFRYYVDCMM EKEPPGEREY ALLQQLFEQN IEDWEQVILG IAHFLSQMTR YTSFVIVPAV KFTEFRNLQL LPLDQGKALL LLVCDMGVIM HRIISIPEFI SSQDLQAITG LFNQAFIGKR LEEVKRSDLQ LIRENLSQRR QIIDNALEAI DNLLQNSRDE KVMVSGALNI LNEPEFKDMD KLKRILNVLE EDDSLRQIIP GELGEAVDIK IGRENPLEEI KEMSLVVAGY KSFGELGKIG VIGPVRMEYW KAVGTVETVR DIIEDYLKGL G
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