Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1478 |
Symbol | |
ID | 4282273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1696690 |
End bp | 1697457 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638138356 |
Product | ribonuclease H |
Protein accession | YP_754154 |
Protein GI | 114567000 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGAGTG AGCAACCGCT ATACAACAAA AGGCTTTTCA GCGACATCAT AGATAAATCT ACTCACTTTA AGGAAGGATT GGGTTTGGAT AAGCAAAAGT ATTTATTAGA TGAAGTTAAG AGAATAGAGG ATTTAAAGCG ATATGAATAT GAGGCTTACA ATAATGGTTT TCGATACATA GCTGGAATCG ATGAAGCAGG CAGAGGACCT ATTGCCGGCC CAGTAATGGC GGCTGCGGTT ATTCTATCCC GTGATTTCTT TTGTCCCGGG ATTAATGATT CCAAGAAACT TACAGCTTTG AAACGCTCTA AATTGGCGGC AGAGATAAAA AAACAAGCCA TTTCATGGTC GGTGGCGGCG GTCTTTCCTT CTTACCTGGA TAAGGTAAAC ATTCTTAATG CTACCCGTGA GGCTATGTTG TTAGCAGTAA AAAATCTCTC CCCTCGTCCG GAATTTTTAC TTATTGATGC CGTGCAATTA CCCGATATAG ATATTAAACA GTATCCTTTA ATAAAGGGTG ACAGTTTGAG TGTATCCATA GCCGCTGCCT CCATCCTGGC CAAAGTGGAG AGAGACCGGG TAATGGAGGC ATTTGACTCA CTCTATCCCG GCTATGGATT TTCCCGGCAT AAGGGTTATG CTACCCGGGA ACACCTGCAA TCTTTGCTCA GGTTGGGTAC TTGTGCTTTG CACCGGGTGA GTTTCGAACC GGTGAAGTCT ATGGTATTAG GAGCTAGATA TGGAGAACAG CCAGCTTTAT TTGAATAA
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Protein sequence | MRSEQPLYNK RLFSDIIDKS THFKEGLGLD KQKYLLDEVK RIEDLKRYEY EAYNNGFRYI AGIDEAGRGP IAGPVMAAAV ILSRDFFCPG INDSKKLTAL KRSKLAAEIK KQAISWSVAA VFPSYLDKVN ILNATREAML LAVKNLSPRP EFLLIDAVQL PDIDIKQYPL IKGDSLSVSI AAASILAKVE RDRVMEAFDS LYPGYGFSRH KGYATREHLQ SLLRLGTCAL HRVSFEPVKS MVLGARYGEQ PALFE
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