Gene Swol_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1478 
Symbol 
ID4282273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1696690 
End bp1697457 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content43% 
IMG OID638138356 
Productribonuclease H 
Protein accessionYP_754154 
Protein GI114567000 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGAGTG AGCAACCGCT ATACAACAAA AGGCTTTTCA GCGACATCAT AGATAAATCT 
ACTCACTTTA AGGAAGGATT GGGTTTGGAT AAGCAAAAGT ATTTATTAGA TGAAGTTAAG
AGAATAGAGG ATTTAAAGCG ATATGAATAT GAGGCTTACA ATAATGGTTT TCGATACATA
GCTGGAATCG ATGAAGCAGG CAGAGGACCT ATTGCCGGCC CAGTAATGGC GGCTGCGGTT
ATTCTATCCC GTGATTTCTT TTGTCCCGGG ATTAATGATT CCAAGAAACT TACAGCTTTG
AAACGCTCTA AATTGGCGGC AGAGATAAAA AAACAAGCCA TTTCATGGTC GGTGGCGGCG
GTCTTTCCTT CTTACCTGGA TAAGGTAAAC ATTCTTAATG CTACCCGTGA GGCTATGTTG
TTAGCAGTAA AAAATCTCTC CCCTCGTCCG GAATTTTTAC TTATTGATGC CGTGCAATTA
CCCGATATAG ATATTAAACA GTATCCTTTA ATAAAGGGTG ACAGTTTGAG TGTATCCATA
GCCGCTGCCT CCATCCTGGC CAAAGTGGAG AGAGACCGGG TAATGGAGGC ATTTGACTCA
CTCTATCCCG GCTATGGATT TTCCCGGCAT AAGGGTTATG CTACCCGGGA ACACCTGCAA
TCTTTGCTCA GGTTGGGTAC TTGTGCTTTG CACCGGGTGA GTTTCGAACC GGTGAAGTCT
ATGGTATTAG GAGCTAGATA TGGAGAACAG CCAGCTTTAT TTGAATAA
 
Protein sequence
MRSEQPLYNK RLFSDIIDKS THFKEGLGLD KQKYLLDEVK RIEDLKRYEY EAYNNGFRYI 
AGIDEAGRGP IAGPVMAAAV ILSRDFFCPG INDSKKLTAL KRSKLAAEIK KQAISWSVAA
VFPSYLDKVN ILNATREAML LAVKNLSPRP EFLLIDAVQL PDIDIKQYPL IKGDSLSVSI
AAASILAKVE RDRVMEAFDS LYPGYGFSRH KGYATREHLQ SLLRLGTCAL HRVSFEPVKS
MVLGARYGEQ PALFE