| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0609 |
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| Symbol | |
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| ID | 4282456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 703194 |
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| End bp | 704498 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638137488 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_753309 |
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| Protein GI | 114566155 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGC CCTACATTAT CGAAAAAAAA CGCGATGGTA AAGATTTGAG CCGGGAGGAA
ATTGAATTTC TGGTCAGGGG TATTGCTGAC GGTACTATTC CCGACTACCA GATTTCCGCC
TGGGCTATGG CAGTATATTT TAGGGGCATG AACCCAAGGG AGACCCGGGA TTTAGCTCTG
GCCATGGCCT ATTCCGGTGA AGTGATAGAA CTTTCAGCAG TGGAAGGGGT CAAAGTGGAC
AAGCACAGCA CAGGTGGGGT GGGAGACAAA ACTACCCTGG TAGTTATTCC GCTGGTAGCG
GCAACCGGCG TACCCGTGGC TAAAATGTCC GGACGGGGCC TGGGTCATAC CGGAGGAACT
ATAGATAAAT TTGAGTCTAT TACTGGATTT AAAGTGGAAA TGGCTTATCC GGCTTTCTTG
CAGCAGGTAA GTCAGATTAA GGCGGCGGTA GTATCACAGA GCGGCAACCT GGTGCCGGCA
GACAAGAGGC TTTACGCTAT CCGGGATGTG ACAGCAACTA TAGACAGTAT ACCTTTGATA
GCTTCCAGCG TAATGAGCAA AAAAATTGCT TCGGGAGCTG AGGGAATAGT ACTGGATGTT
AAAGTCGGCA GCGGCGCCTT TATGAAAAGT TACGAGAAAG CCAGTCAACT GGCTAAAACC
ATGATTGATA TCGGTAGAGG AGCAGGCCGT AAGGTAGCAG CTCTGCTCAG CAATATGGAT
CAACCCCTGG GAAATGCGGT GGGAAATGCC CTGGAGGTTA AAGAAGCTAT TGACACTCTG
CAAGGGCAGG GACCTCCTGA TCTGGAAGAA CTGTCGCTGG AGCTGGCGGC GCAGATGATA
GTTCTGGGGG AAAAGGCCGC CAGTATTAAT GATGCGCGGG ATCTAGCCCG AGCTGCATTG
AAAAGCGGCC TGGGCTTGGT CAGTTGGAAA CAGATGGTAG AGACCCAGGG AGGAGAATTG
AACTATTCCC TTCCCAGCTA CGGGCTCCCG GAAGCCGCTA TTAAGGAGAG AATCCTAGCG
GATAAGCGGG CGTATATAGA GAATCTGGAT GCCCTCAAAA TAGGGCAGGC CGCCATGCTG
CTGGGTGCAG GTAGAGAACG ATTGGGAGAT ATAATCGATT ACGCTGTGGG TATTGAATTA
TTAAAAAAAC CGGGAGACCT GGTTGAAGCC GGGGACACCC TGGCGATAAT CCATGCCAAT
GACCCCGGTC GTTTGGAAAT GGCCCGGAAA ATCCTCTTGG ATGCTTACCA CTTTTCTGAT
GAAGCAGTGG AAAAAAAGCC CTTGATTATT GAAACCATTA GCTGA
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| Protein sequence | MKMPYIIEKK RDGKDLSREE IEFLVRGIAD GTIPDYQISA WAMAVYFRGM NPRETRDLAL
AMAYSGEVIE LSAVEGVKVD KHSTGGVGDK TTLVVIPLVA ATGVPVAKMS GRGLGHTGGT
IDKFESITGF KVEMAYPAFL QQVSQIKAAV VSQSGNLVPA DKRLYAIRDV TATIDSIPLI
ASSVMSKKIA SGAEGIVLDV KVGSGAFMKS YEKASQLAKT MIDIGRGAGR KVAALLSNMD
QPLGNAVGNA LEVKEAIDTL QGQGPPDLEE LSLELAAQMI VLGEKAASIN DARDLARAAL
KSGLGLVSWK QMVETQGGEL NYSLPSYGLP EAAIKERILA DKRAYIENLD ALKIGQAAML
LGAGRERLGD IIDYAVGIEL LKKPGDLVEA GDTLAIIHAN DPGRLEMARK ILLDAYHFSD
EAVEKKPLII ETIS
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