| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0515 |
|---|
| Symbol | |
|---|
| ID | 4281668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 609301 |
|---|
| End bp | 610092 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638137399 |
|---|
| Product | type I restriction-modification system (specificity subunit) |
|---|
| Protein accession | YP_753220 |
|---|
| Protein GI | 114566066 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAGTGA CATCAACAAC AGGTATTTTA AACCTGAAAT TGGAAAGATT TGTTAAGGAA
ACAGAAATAA AGTACCGTCC TCTTGAAACC CAAAAGCAAA TTGCCAAAAC CTTGGACACC
GTCTCAGAAT TGCTTGCCAT ACTCAAACAG CAGCTTGCAG AGCTGGACAA CTTGATAAAA
ACCACCTTTT ACGATATGTT TGGTGATCCA GTGACGAATG AAAAAGGGTG GGAGATTAAA
ACTATTGCTG AGATTGCGGA ACAAAAACTA TCATATGGTT CGGGTGCTTC CGCTATCGAA
TACGATGGTA TTACAAGATA TATAAGAATA ACTGATATAA ATGATAATGG TTCTCTCAAT
GATGATATCG TTTCACCAAG CGAAACTTCT GCTAAATACA ATTTGAATGA TGGAGATATT
CTCTTTGCAA GAAGTGGCGC AACTGTTGGA AAAACACTAA GATACAGAAG AAGTTTTGGA
CGGTGTATTT ACGCAGGATA TTTAATTCGG TTGGTACCCA AAAAAGCCTT GGTATTGCCT
GATTATATTT ACTACTTCAC AAAAACTGAC TATTATAAGG GATTTATCGA GTCTAACATG
AAAACCGTAG CACAGCCTAA TATAAATGCT CAACAATATG GTACATTTAA GATTTGTGTA
CCGCCTCTCA ATCTACAGAC ACAATTTGCC GAAATCGTCA CTAAAACCGA AGAGCAAAAA
GCCCTGGTGC AAAAAGCCAT CAATGAAACT CAGTACCTCT TTGACAGCTT AATGAGTGGA
TATTTTGATT AG
|
|---|
| Protein sequence | MAVTSTTGIL NLKLERFVKE TEIKYRPLET QKQIAKTLDT VSELLAILKQ QLAELDNLIK
TTFYDMFGDP VTNEKGWEIK TIAEIAEQKL SYGSGASAIE YDGITRYIRI TDINDNGSLN
DDIVSPSETS AKYNLNDGDI LFARSGATVG KTLRYRRSFG RCIYAGYLIR LVPKKALVLP
DYIYYFTKTD YYKGFIESNM KTVAQPNINA QQYGTFKICV PPLNLQTQFA EIVTKTEEQK
ALVQKAINET QYLFDSLMSG YFD
|
|---|
| |