| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0110 |
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| Symbol | |
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| ID | 4282386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 117402 |
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| End bp | 118358 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638137011 |
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| Product | nifR3 family TIM-barrel protein |
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| Protein accession | YP_752837 |
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| Protein GI | 114565683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000348489 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTTTTA TTGGTAAACA GAAGATGGAG AACCGCGTCT GTGCTGCTCC GATGGCTGGA
GTTAGCGATA AGGCCTATCG CGTTTTGGCA CGAGACTTTG GCTGTGGGCT GGTCTGCAGT
GAAATGGTAA GTGATAAAGG CCTGGTTTAC GGTCAGGGGC GAACTAGCAA AATAGCCGAT
AGCAGTGGAG AAAAACGACC GGTGGCCGTA CAGATTTTTG GCTCTGAAGC CGAAAGCATG
GCCACCGCTG CCCGGATAGT TGAAGAGATG GGAGCAGATA TCATAGATAT CAATATGGGC
TGTCCCACCC CCAAGATCGT GAAAAACGGG GAAGGGGCAG CCTTGATGCT GGATATAACC
AAAAGCCGGG GCATAGTTCG GGAAGTGCTG CGAGTGGTAA AAGTTCCAGT AACGGTTAAG
ATGCGCAAGG GCTGGGACGA AAACAGTATT AATTGCCTGG AACTGGCCCA GAAGCTAGAA
GAAGAAGGAG TCGCTGCGAT CTGCCTTCAT CCCCGCAGCC GCCAGCAATT CTTTTCCGGA
TCGGCTGACT GGAATTTGAT AAAAGAGATG AAGAAAGAAC TTAAGATACC AGTAATCGGC
AACGGGGATA TCTGGTCGGC TGATGATGCC CAGCGGATGA TTGATTTTAC CGGCTGTGAT
GCGGTAATGA TTGGCCGGGC CGCCCTGGGA AATCCTTTCA TTTTCCGGGA AACGTTTGAG
CTCTTAGAAA ATAACCGCCG GATACCCCCA CCCAGCCGCG AAGAAAGGCT GCAAACTGCC
ACCCGGCATC TAAACCTTGT CTGCCAATTC AAAAGTGAAG CAGTAGCCGT CCGGGAAATG
CGCAAACACT TTGCCTGGTA TATCAAGGGA CTCCCTGGAG CCACCCGTGT TCGTCAGGAG
ATAAACCGTG CCGCCTCCCG TGATGAACTG CTCTTTGCCC TCGATTCCCT GCTGTGA
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| Protein sequence | MFFIGKQKME NRVCAAPMAG VSDKAYRVLA RDFGCGLVCS EMVSDKGLVY GQGRTSKIAD
SSGEKRPVAV QIFGSEAESM ATAARIVEEM GADIIDINMG CPTPKIVKNG EGAALMLDIT
KSRGIVREVL RVVKVPVTVK MRKGWDENSI NCLELAQKLE EEGVAAICLH PRSRQQFFSG
SADWNLIKEM KKELKIPVIG NGDIWSADDA QRMIDFTGCD AVMIGRAALG NPFIFRETFE
LLENNRRIPP PSREERLQTA TRHLNLVCQF KSEAVAVREM RKHFAWYIKG LPGATRVRQE
INRAASRDEL LFALDSLL
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