Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_3764 |
Symbol | |
ID | 4280657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 4474481 |
End bp | 4475005 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638136577 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_752430 |
Protein GI | 114564916 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000856229 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTACTA TCGTATCCGT ACGCCGTAAT AATCAAGTTG TCATCGCTGG TGATGGCCAA GTGTCTCTAG GCAATACCGT GATGAAAGGT AATGCACGTA AAGTGCGCCG CCTATACCAC AATAAAGTAT TAGCCGGTTT TGCTGGCGGT ACTGCCGATG CATTTACTCT TTTTGAGCGT TTTGAAGCCA AGCTCGAAAT GCATCAAGGC CATTTATTAA AATCTGCCGT AGAGCTTGCC AAAGATTGGC GTAGCGACAA AATGCTGCGT AAGCTCGAAG CTATGTTGGT TGTGGCTGAT ACTGAATCAT CATTAATTAT TACCGGTAAT GGCGACGTCG TTCAACCGGA ATATGACTTA ATTGCGATTG GTTCTGGCGG AAACTATGCT CATGCATCAG CCTTAGCATT ACTGCAAAAT ACTGAGTTAA GCGCGGAAGA AATAGCAGAA AAATCACTGA CGATTGCAGG CGATATTTGC GTATTCACCA ACCAATTCAA AACTATCGAA AAGTTAGACT ACTAA
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Protein sequence | MTTIVSVRRN NQVVIAGDGQ VSLGNTVMKG NARKVRRLYH NKVLAGFAGG TADAFTLFER FEAKLEMHQG HLLKSAVELA KDWRSDKMLR KLEAMLVVAD TESSLIITGN GDVVQPEYDL IAIGSGGNYA HASALALLQN TELSAEEIAE KSLTIAGDIC VFTNQFKTIE KLDY
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