| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3538 |
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| Symbol | |
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| ID | 4280431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 4207613 |
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| End bp | 4208584 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638136350 |
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| Product | ABC transporter related |
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| Protein accession | YP_752204 |
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| Protein GI | 114564690 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAT CCGTAGACCC ACAATGGGTA ATTCAAGCTC ATGGGCTAAC CAAAAAATTT
GGCGACTTTA CTGCGGTAGA GCAATTAGAC TTATTGGTGC CTAAAGGCAA CATTTATGGT
TTTTTAGGCC CTAATGGCTG TGGTAAATCA ACCACTATTA GAATGTTAAC CGGTTTACTC
ACCCCCACAG AAGGCACCAT TAATGTCATG GGATTAGCCA TCCCGAAGCA AGCTGAAGCA
TTACGCCATA ATATTGGTTA TATGACCCAA AAATTTTCCC TCTACGATGA CTTAACCGTT
ACAGAGAACT TGCAATTTAT TGGCCGAATC TATGGTATCG ACAATAGCAC CTGCAAAAAA
CGCATTGCTC AACTGCAAAG CACTTACAAA CTAAGCCAAT ATCAGCATCA ACTGGCCGGT
ACCCTTAGCG GTGGACAAAG ACAACGATTG GCCCTCGCCT GCGCATGTTT AAATCAACCA
AAATTACTGT TTTTAGATGA ACCCACCTCA GCCGTTGATC CACAAAACAG GCGTGACTTC
TGGGAGCAAT TGTTCGATTT ATCAGAACAA GGCACCAGTA TTTTAGTGAC TACCCATTAT
ATGGATGAGG CCGAACGCTG CCATAAAATT GCCATTATGG AAAAAGGCAG GATCAGAGCG
GATGACACGC CAAAAGCATT AATGGATAAC ATCAATGCCC ATGTGGTTGA AATCAACACC
ACTGATTTAA GGCCGTTAAA ACAAGCATTA ATTAGCCACA TTGAAGTGAC ATCTGCGGCG
CAGTTAGGCC ATAGATTACG GGTATTGGTC AGCAAACAAG TGGTAGATCC TATCTCTTGG
TTACTGCATC AGTGCCAACA GCATAATCAC CCCGTTAACC TGCAAGATAT TCACTTAGTT
AGCGCTAATC TTGAAGACGT GTTTGTCAGT CATACTGGCC AGCGTGTTCC AGCCTCCCAT
GAAGCAACAT AA
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| Protein sequence | MTSSVDPQWV IQAHGLTKKF GDFTAVEQLD LLVPKGNIYG FLGPNGCGKS TTIRMLTGLL
TPTEGTINVM GLAIPKQAEA LRHNIGYMTQ KFSLYDDLTV TENLQFIGRI YGIDNSTCKK
RIAQLQSTYK LSQYQHQLAG TLSGGQRQRL ALACACLNQP KLLFLDEPTS AVDPQNRRDF
WEQLFDLSEQ GTSILVTTHY MDEAERCHKI AIMEKGRIRA DDTPKALMDN INAHVVEINT
TDLRPLKQAL ISHIEVTSAA QLGHRLRVLV SKQVVDPISW LLHQCQQHNH PVNLQDIHLV
SANLEDVFVS HTGQRVPASH EAT
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