| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_3138 |
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| Symbol | |
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| ID | 4280041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3755917 |
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| End bp | 3756867 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135957 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_751814 |
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| Protein GI | 114564300 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.27318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTAT CTCGTATCGA CTTGAACCTC CTTGTTTATT TAGATGTTTT ACTGCGTGAA
AGAAACGTGA CTAAAGCTGC AGACCAGCTT GGGATCAGCC AGCCTGCAAT GAGTAACGGC
CTAAAACGCT TACGAAACTT GTTTGACGAT CCCTTACTTA TTCGCACGAG TCAGGGCATG
ACACCCACCG AACGTGCAAA TGAATTACAA CCCATTATCA GTGAACTGAT TATTGGGCTG
GAAAAAGCCG TACAACCGCG TGCCAATTTT GATCCACTGG AAAGTGATAA AGTCTTCCGT
GTTATGGCAA GTGATTATGC TGAAGCGACG TTAATTCCAC CGCTCATTGC TAAGCTTCGT
ACTCAAGCAC CCAACATTAT TTTAGATATC ATGACCCCAA GTGATGTCAG TTTCCCTGAT
GTAGAACAAG GAAGAGTCGA TATGGTGATC AACCGTTTCG ACAGTATTCC GCAATCATTC
CATCAAAAAA TATTGTGGAG TGATGATTTT AGCTGCTTGA TTAGTAAGGG TAATCCTGTT
TTAAAGAAGT TTTCTTTAGA CAGTTATTTA AAAGCTAAGC ATGTGTGGGT GAGTAAAACA
GGGATGGGTG TTGGGGTAGG GATGAACCCT GATGATGTTC AGCGTTTGGG CTGGGTAGAT
GAAGCATTAA CTCGAATGGG TGTGAAACGC CAGATCACCG TTTTTACACG CCATTATCAA
GCCGCCTGTT TGTTGGCTGA GCAACAAGAT TTGATCGCAA CCATACCAAG TAAGATGGCT
CGTCATCACA TCAATAATGA ACGGGTGAGC ATTGTTCCGC CGCCTTTTAT TATTCAACCC
ATCGCCTTGA CTATGGCCTG GAGCCCTTTG CTTCAGCATA ATCCCGCGCA TCAATGGATG
CGACAACTGA TCACTAAAAC CGCAGAAGAG ATAAATAGAG GGGATGTTTA A
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| Protein sequence | MNVSRIDLNL LVYLDVLLRE RNVTKAADQL GISQPAMSNG LKRLRNLFDD PLLIRTSQGM
TPTERANELQ PIISELIIGL EKAVQPRANF DPLESDKVFR VMASDYAEAT LIPPLIAKLR
TQAPNIILDI MTPSDVSFPD VEQGRVDMVI NRFDSIPQSF HQKILWSDDF SCLISKGNPV
LKKFSLDSYL KAKHVWVSKT GMGVGVGMNP DDVQRLGWVD EALTRMGVKR QITVFTRHYQ
AACLLAEQQD LIATIPSKMA RHHINNERVS IVPPPFIIQP IALTMAWSPL LQHNPAHQWM
RQLITKTAEE INRGDV
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