| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2628 |
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| Symbol | |
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| ID | 4279535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 3143255 |
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| End bp | 3145861 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135424 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_751307 |
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| Protein GI | 114563794 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000198241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAGA ACGTATTAGC TAAGTCGGTG CGCTTAGCAC TGATCAGTGG TGCAGCAGCA
GCCGCATTTG CTTCGCCAGC AGTTTTTGCT GCTGATGAAG ATGGCGCAAA AGTAGAGCGT
ATTGAGGTTA CCGGTTCGCG TATTAAGCGT TCTGACCTTG AAGGTGCTTC ACCAATAACG
ACCATTACAA CTGAAGATAT GAAGATGGAA GGTAACTTTA CAGTTGCTGA CGCACTTCGT
AACAGTAACT TGAACTCTTT CGGTTCATTC TCTGAGCGTT CAGGTAGTTC TGCACAATCT
CAAGCAACTA TTAACCTACG TGGTGCAGGC TCAAGCCGTA CTCTAGTACT TATTGACGGT
AAGCGTTTCC CAGGTTCACC AACGCTAGGT GGTGCATCTG CTAACTTGAA CGCTATTCCA
ATGGCTGCAG TTGAACGTAT CGAAATTCTA ACTGATGGTG CATCTTCAAC TTATGGTTCT
GACGCGATTG CTGGTGTTGT TAACATCATC ATGAAAAAGA ACTATCAAGG TATTGAGTTC
AATGTCGGTG GTGGTTCACG TGACCGTGAC GGCGGCTTAA CGAGTAAAGA ATTCTCGGTT
GTTGCTGGCT ATCAAATGGA TAAAGGTAAC ATTACTTTTG CATTTGATCA TCAAGACCGA
AAAGGCATTT CTGATGCAGA CCGTGACTTT ACTGCACCAT GGATGGAAGA CTTAAATGGT
GATGGCGTTA TTCAAGCATA TTCTGAGACT GATGGCTGGA GTTATTATGG CGCAAGCGTA
AAAGGTCCTG ATGGCATTTA TCAGCCATCT CCGCTTTGTG GTGATTTAGC TGCTGAATAT
GGTGACAATG TATTTAAACA AGTACGTGGT GATGATCAAT TTGGTGCTGG TTCAGATTTG
TGTATGTATG CATATGGTAA TGTGTCATAT AACAAAGCCT CTACAGATCG CAATACGGTA
TATGTTGATG CTAACTATGA AATCGCTGAA GACTTAGAAT GGTTTGGCCG AGTAATGGTT
ACACAAAGCA ATTCATTTGG TCGTTATGCA CCTCCTGCAG CGAATTGGAA TAACATGGCA
GCAGATAACC CACATAACCC ATTTGATGTA GAAGCAAAAG GTTATTTCCG TTGGGTTGGT
ATCGGTACTC GTGATGGGAA CGTAGATGAT TACAACCAAG ATTACCTAAC TGGTTTACGT
GGTACAATCA GTGCGCTTAA TGATGCAGAG TGGGAAGTTT ACTACCACCA CAACATTGCC
GATAACAAAT CTATCGGTGA GTATTACTTA AGTTATTCAG GTCTTGCTTA TAACGAAGCA
AATGGTATTG ATTTGGGTTC TGAAGCTGGC ATCAATAACA TGAAAGCCAC CACTTTAACT
CAAGGTAGTG CGATATTTGA TCAATATAAC GCTGGTATTG GTTTTGATGC GTTTGAATTA
CCAGGTGGTT CTGTAGCACA TTATGTAGGT TTAGAATATT TTGACCAACA GTATAGTGAA
GTGTATGACG CACAGTCAGA AGCTGGTTTA ATCGGTGGTA GTGCTGGTAA CTCTGCAGCA
GGCGACCGTC AAGTGTGGGC AATGTTTTAC GAAGCGGTAT TACCGATAAC AGATGACATT
GAATTAAACT TAGCGGCTCG TTACGATGAT TACAGTGACT TTGGTGATAA TATCGCACCT
AAAGCAGCTA TACGCTGGCA AGCACTTGAA AATGTTGTTG TACGTGCATC ATATTCAGAA
GCTTTCCGTG CTCCAGCATT GGATCAACTA TTTGCAGCAA CTACATTCAG TGCTGAAGAT
GGTATTGATA AACCATATTG TGAAGCAACT GGTACACCTT GTTCTGAAAG ACAGTTTGAT
ACATATATTA GTGCAAACAA AGAACTTGGC CCAGAAACGT CTCAATATGT TAACTTCGGT
GTAGCATGGG ATATCGTTGA TGATATCGGC TTAAAAGTTG ATTATTTTAA CCTTAATATT
GACGATGTAA TTGCTCAACG CTCAATTACA AGTGTTATGA CTGGTATTTA TGAAGGTACG
TTGGCTCCTA GTAATACATT CTATGTAAAA CGTGATCCAG CAAGTGCAGG TCAAGCAATT
GGTGCTGCAT CTGAAGTCGG TACTGGTTAT AGCAATGCTA ATACCTTAGA AATTTCAGGT
ATCGATGTTG CGTTAAACGC AAAATTTGAA ACCAATATCG GTGACATAGG CTTTAACTGG
ACAAATAGTT TTGTTCTTGA TTATACCGAA GAAGTTGATG GTGGTGCTGA GTCACGTGAT
ACTTCTGGTT GGAATGGTCA GCCAGATTAC AAGTCTGTAT TCACAACAAA TTACCGCATG
GGTGATCATA GTCTATCTTG GAACATGAAT TACACTTCAT CTACATTCTA TTTTGAAGAT
GATGCTTCTA AAGGTGAGTT AGATTCATGG TTAATTCATA ACATTAGTTA TGTTTATGAT
GCTGGTAATT ATGGTTCAAT TTTATTAGGT ATCAACAACC TAACTGATGA AGATCCTGTT
CTTTCTCCTG ATGGAAAGTT TGAGAACGCT GATCTATATA ACAACTACGG TCGTGAGTAT
CGTGCAAGTT ATACTCTTAA GTTCTAA
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| Protein sequence | MHKNVLAKSV RLALISGAAA AAFASPAVFA ADEDGAKVER IEVTGSRIKR SDLEGASPIT
TITTEDMKME GNFTVADALR NSNLNSFGSF SERSGSSAQS QATINLRGAG SSRTLVLIDG
KRFPGSPTLG GASANLNAIP MAAVERIEIL TDGASSTYGS DAIAGVVNII MKKNYQGIEF
NVGGGSRDRD GGLTSKEFSV VAGYQMDKGN ITFAFDHQDR KGISDADRDF TAPWMEDLNG
DGVIQAYSET DGWSYYGASV KGPDGIYQPS PLCGDLAAEY GDNVFKQVRG DDQFGAGSDL
CMYAYGNVSY NKASTDRNTV YVDANYEIAE DLEWFGRVMV TQSNSFGRYA PPAANWNNMA
ADNPHNPFDV EAKGYFRWVG IGTRDGNVDD YNQDYLTGLR GTISALNDAE WEVYYHHNIA
DNKSIGEYYL SYSGLAYNEA NGIDLGSEAG INNMKATTLT QGSAIFDQYN AGIGFDAFEL
PGGSVAHYVG LEYFDQQYSE VYDAQSEAGL IGGSAGNSAA GDRQVWAMFY EAVLPITDDI
ELNLAARYDD YSDFGDNIAP KAAIRWQALE NVVVRASYSE AFRAPALDQL FAATTFSAED
GIDKPYCEAT GTPCSERQFD TYISANKELG PETSQYVNFG VAWDIVDDIG LKVDYFNLNI
DDVIAQRSIT SVMTGIYEGT LAPSNTFYVK RDPASAGQAI GAASEVGTGY SNANTLEISG
IDVALNAKFE TNIGDIGFNW TNSFVLDYTE EVDGGAESRD TSGWNGQPDY KSVFTTNYRM
GDHSLSWNMN YTSSTFYFED DASKGELDSW LIHNISYVYD AGNYGSILLG INNLTDEDPV
LSPDGKFENA DLYNNYGREY RASYTLKF
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