| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2218 |
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| Symbol | |
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| ID | 4279130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2653387 |
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| End bp | 2654136 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135015 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_750902 |
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| Protein GI | 114563389 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGA AAAACATATT AATCACAGGG GCGAGTTCAG GTTTAGGCCG CGGTATGGCA
ATTGAGTTTG CTAAGCAAAA TCATAATCTT GCTTTGTGCG CGAGACGAAT AGACCGTCTT
GAAGCATTAA AGCAAGAGTT ACTAGTGATT AATCCCAATA TCCAAGTATT GATTAAATCA
TTGGATGTTA ATGACCATCC GCAAGTTTTC GACGTTTTCA GTCAATTCAA ACAAGAGTTC
GGTCAACTTG ACCGCGTCAT TGTCAACGCA GGCATGGGTA AAGGTGCCTC TATCGGTACT
GGTTTTTTTG AAGCTAACTT ACAAACGGCG CAAACCAACT TTATTGCTGC AATAGCCCAG
TGTGAAGCTG CGATGGCTAT TTTTCGTGAA CAAAATAGTG GTCATTTAGT GACCATTTCA
TCCATTAGTG CCGTACGTGG GTTTAGACGT GCTATGACGG TTTATGCGGC GACTAAAGCC
GCCTTAACGT CGTTATCTGA AGGTATCCGT ATCGATGTGA TGAACACACC AATAAAAGTG
ACCTGTATAC ACCCTGGCTT CATTCGCAGT GAGATTAATG AAAAAGTGAA AACGGTTCCG
TTTATCGTCG ACACCGAGAC AGGTTGTAAA GCGATGGTGA AAGCGATTCA AAAAGAAAAA
GCTAATGCTT ATGTACCGAG TTATCCATGG GCTATTTTAC ATTGGGTATT ACGTATAGCC
CCGCTTAGTG TGATCCGTAA AATGAGTTAA
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| Protein sequence | MKRKNILITG ASSGLGRGMA IEFAKQNHNL ALCARRIDRL EALKQELLVI NPNIQVLIKS
LDVNDHPQVF DVFSQFKQEF GQLDRVIVNA GMGKGASIGT GFFEANLQTA QTNFIAAIAQ
CEAAMAIFRE QNSGHLVTIS SISAVRGFRR AMTVYAATKA ALTSLSEGIR IDVMNTPIKV
TCIHPGFIRS EINEKVKTVP FIVDTETGCK AMVKAIQKEK ANAYVPSYPW AILHWVLRIA
PLSVIRKMS
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