| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2212 |
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| Symbol | |
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| ID | 4279124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2646401 |
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| End bp | 2648050 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135009 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_750896 |
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| Protein GI | 114563383 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCAA CTAACATGTT TTTTCGCAAA ACGACAATTG CTAACCGTTT ATTAGGAATG
TTGGCATTAG CGATCATTGC TACTGTAATC GTGTTCTGGT TTTCATTAAC ACGAGTTGAA
AACGTGTTAA TTAATGAGAA AGAAGCTAAA TTGAATGCTT TGGTAGATAT CGCGACCACC
ATTGCTGATA AATATTATCA AGATGCCGAA TCAGGAATCA TGACCGAAGA TGAAGCTAAA
ATCATGGCTT TGGCGGCGAT AGATAAACTA CGCTATTCAG GCAATGAGTA TTATTTCAGT
ATTGATACTC AAGGGACGAT GATTCAGCAT GCTTTTGCAA AGCAATTAGT GAATACAAAA
GTATTGGCAA TGCAAGATCC AAATGGCGTT AAGCTGTTTG AACAAATGAT CCAACGTACC
GAACAGCAAG ATGCCGCACG GGTGGATTAC ATGTGGAACA AACCAAAACA TGAACAACCT
AGCCCGAAAA TGTCAGTGGT TAAGCGCTTT AGACCTTGGG GTTGGATCAT CGGGACTGGC
ATTTATGTTG ATGACATTCA AGCCGATAAA AATCAATTCA TTACTCAATA CTTATTGTTA
TTGACACTGG TTTGGCTGCC GGTCATCTTA CTGCTGTTTT TTATCATTCG CAGTATTTCA
GGGCCGATGA TTGAAACCAT TAGCGCGTTT AAAAATATAG CCAAGGGCGA GGGGGACTTG
ACCTTACGTT TGTCTGAAGA GGGTAATGAT GAACTCAAAC AAATCGCACA TCATTTCAAT
GCCTTTATTG ATAAAATCCA GAAAGTCATT ATTTCTGTCA GCCATTCGGT TGATGAATCG
AGTCGTTTAG CTAAAAACAT GTCGACGATT GCACAACAGG CCAATCAAAT TTCATCCAAT
GTGCAAGCCG AAACTGAGAA TGTGGCAACC GCGATTAATG AAATGTCGAT GACTGCATCA
GAAGTCGCTT CTAATGCACA ACTGGCAGCA GACAGTACGC ACCATGCAGA CAAAGAGGCA
GACAAATCAG CTTCCGTTGT CGATAACGCA ATGAAAAAAA TATCTGAATT ATCCAGTGAA
TTAGCTGCGA CAGAAGATGT TGCAAAAGGC TTACAAGTAA GTTCAAGTAA GATTGGTCAA
ATTCTGGATG TGATTGTGGG AATAGCAGAT CAAACTAATT TGTTAGCGTT GAATGCTGCC
ATCGAAGCCG CTAGAGCAGG TGAGGCTGGT CGTGGTTTTG CCGTTGTTGC TGATGAAGTT
CGAACGCTTG CTAGCCGAAC TCAAGCTTCA ACAAGTGAAA TTAATCTTAT CATCGACGCA
ATCAGAAGTG CCATTGATAG TGTTAATGCT TCTGTTGCAA GGGCTAAAGT TAAATCATCT
GAAACGGTCA ATGAAACACA ACAAGTTGTA GGTGCACTTG ATAATATTAA GTCTTCAATT
GAGCAAATAT CGCAAATGAA TGTTCAAATA GCAGCCGCCA CAGACGAGCA AAGCACTGTT
ATTGGCGAAC TGAATATGAA TATTACTCGC ATCAAGGACA TGTCGTTAGA AAATCGAACT
CAGAATGAGC TCATTAATAA AGGCAGTATG GGTATCGAAC AAGGTGCAAT TCAGTTACAT
CAACTTGTGG ATCAATTTAA AGTAAAATAG
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| Protein sequence | MNPTNMFFRK TTIANRLLGM LALAIIATVI VFWFSLTRVE NVLINEKEAK LNALVDIATT
IADKYYQDAE SGIMTEDEAK IMALAAIDKL RYSGNEYYFS IDTQGTMIQH AFAKQLVNTK
VLAMQDPNGV KLFEQMIQRT EQQDAARVDY MWNKPKHEQP SPKMSVVKRF RPWGWIIGTG
IYVDDIQADK NQFITQYLLL LTLVWLPVIL LLFFIIRSIS GPMIETISAF KNIAKGEGDL
TLRLSEEGND ELKQIAHHFN AFIDKIQKVI ISVSHSVDES SRLAKNMSTI AQQANQISSN
VQAETENVAT AINEMSMTAS EVASNAQLAA DSTHHADKEA DKSASVVDNA MKKISELSSE
LAATEDVAKG LQVSSSKIGQ ILDVIVGIAD QTNLLALNAA IEAARAGEAG RGFAVVADEV
RTLASRTQAS TSEINLIIDA IRSAIDSVNA SVARAKVKSS ETVNETQQVV GALDNIKSSI
EQISQMNVQI AAATDEQSTV IGELNMNITR IKDMSLENRT QNELINKGSM GIEQGAIQLH
QLVDQFKVK
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