Gene Sfri_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2009 
Symbol 
ID4278921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2382688 
End bp2383140 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content37% 
IMG OID638134796 
Producthypothetical protein 
Protein accessionYP_750693 
Protein GI114563180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000579412 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACAAAC TTGTCCGAAT TATCATTTTA AATTTTTTGT TAATGTTTTT AGTAGCCTGT 
GACAACCCAC AAACACAAGA ACACGCTAAT TTAGCCATCG ATAAAACGTT ATGTCAGTTT
TCTGTTGGAG AATGTTACAA AAAAGTAGCC GACTTGCAGG TCGGTTTATT GATTGATCCC
GTCAATACCC CCAGCGAAAA ACCATTAATA GTTACGCTTA GCAGCAATCA AGCGATCACT
AATATTTCAA TTAGAATTGA AGGGCGCGAC ATGTTCATGG GTATTATCCC AGTTTCATTG
TCCGAAATAA AAGATAATGT CTATCAAGGA CCATTGATTT TTGGCTCATG CAGCAGTGAT
TATATGGTAT GGCGAGTATT TGTTTCATTT GATTACCAAC AACAGCCACG GACATTAATG
TACGATTTCT TAGCCGATAA CGATAACAAC TAA
 
Protein sequence
MHKLVRIIIL NFLLMFLVAC DNPQTQEHAN LAIDKTLCQF SVGECYKKVA DLQVGLLIDP 
VNTPSEKPLI VTLSSNQAIT NISIRIEGRD MFMGIIPVSL SEIKDNVYQG PLIFGSCSSD
YMVWRVFVSF DYQQQPRTLM YDFLADNDNN