| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1694 |
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| Symbol | |
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| ID | 4277720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2000369 |
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| End bp | 2001268 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134479 |
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| Product | ABC transporter related |
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| Protein accession | YP_750383 |
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| Protein GI | 114562870 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATCA TTCAATGTGA CAACCTTTCT AAACAATACG GTAATAAACT TGCGCTCGAC
ACTGTATCGT TAACGCTTAC ACAAGGCGCT CCTATAGCAT TAGTTGGCCC CAATGGTGCC
GGTAAAACAA CGCTATTCAG TTTACTCTGC GGTTATATCC AACCAACCAG TGGCAGTGTT
AGCATTTTAG GCCATAAACC CGGTAGCAAA GCGTTACAAG GGCTATTGTC GGCATTGCCT
CAAGATGCAG CATTGGATCC TAATTTTAGT ATTGTGTCGC AACTTCAGTT TTTTGCCCAA
TTACAAGGCA TGACAGCAGC GGCAGCAAAG CAAGAAGCAT TAAGAGTGCT CACCCTTGTC
GACTTAAGTG ACTCAGCAGA GGCTAAACCT AAAAGTTTAA GTCACGGCAT GAGTAAACGA
GTCTCTATTG CCCAAGCTCT AATGGGTTCT CCTAAAATTG TATTACTCGA CGAACCGACA
GCGGGACTAG ATCCTGCCAA TGCGAAAAAG ATTCGTCAAA TTGTCAAAGA GTTATCCGAC
CATACAACTT TTGTGATCAG CTCGCATAAT CTTGATGAAC TTGAAAAGTT ATGCGACCAA
GTTGTTTATC TAGAACATGG AAAATTGCAG CAGTCGGTAT CAATTAAAGC CAACCAAGCG
ACTGACTTTA TTACGCTGAC AATGAAACAA TGCGACATGG ACAGCCTTCA TCAGCAGTTA
TTAGGTCTTA ACGATATTAT TGAAGTAAGG CGTATCGGTG ATGAGCAATA TGTTATCGAG
TACCAGAAGC AATCCAGCTT CGCCATTGAA ATTCAGTTAT TTGAACTGTT TACTGCTAAC
CAGTGGCAAT ATAAAGCAAT ACTTAAAGGC CGAACCTTGG AAGAAACCTT GTTTTCTTAA
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| Protein sequence | MSIIQCDNLS KQYGNKLALD TVSLTLTQGA PIALVGPNGA GKTTLFSLLC GYIQPTSGSV
SILGHKPGSK ALQGLLSALP QDAALDPNFS IVSQLQFFAQ LQGMTAAAAK QEALRVLTLV
DLSDSAEAKP KSLSHGMSKR VSIAQALMGS PKIVLLDEPT AGLDPANAKK IRQIVKELSD
HTTFVISSHN LDELEKLCDQ VVYLEHGKLQ QSVSIKANQA TDFITLTMKQ CDMDSLHQQL
LGLNDIIEVR RIGDEQYVIE YQKQSSFAIE IQLFELFTAN QWQYKAILKG RTLEETLFS
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