| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1291 |
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| Symbol | |
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| ID | 4278489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1531339 |
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| End bp | 1532790 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134066 |
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| Product | RimK domain-containing protein ATP-grasp |
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| Protein accession | YP_749982 |
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| Protein GI | 114562469 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.696817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCATT TTTTAATTGT CACCGACGAT GTTAATGATT GGCGTCCCTA TTTGCCCAGT
GACCATATGG TCACGGTTCA TGATTATTTA GAAATGGGCG CATTTGCAGA TCAAAGCGCC
ATGCAAGTGA TTAACTTGTG TCGCAGTTAT GATTATTTAA GCACAGGTTA TTATTGCTCG
CTCATGGCGG AAGCTCGCGG GCATCGAGTG ATCCCTCGGG TAATGACCAT TAATGATTTA
TCTCAGGACC GCTTTTTTAG TTTGCCGCAA TCAGGCCTAG ATAAGTTGCC AGAGTCGGTG
AATGAAATCA GCATGAAGCT GTATTTTGGC TATTGTGATA ATCCGTCGCT AGACAAGCTT
GCGCGTAAAA TATTTGAGCG TTTTACTGTG CCTGTATTAC AGGTGAGTTT GTTAAAAATG
TCAGGTAAAT GGCAAGTTAA TACCATTGAA CCGGCTGCGT TTCAGGATTT AACCGAGCCA
GAACAAGATT TATTTGCCAA GTATCTTGAA GTGTTTTCAC AAAAAGTATG GCGTTTACCG
AAACCGTCGA AACGTTATCG TTACGAAATT GCCATGCTGG TGGATGAGCA TGAGAAAATG
CCGCCATCAG ATAAAGCCGC GTTAAAGTTA TTTACTAAGT CGGCTAATCG TATTGGCATG
GATTTAGTCC AAATTGGTTC TCATGATCTG GCTCGGTTAA GTGAATTTGA TGGTTTGTTT
ATTCGCTCAA CCACTAATAT CAGCAACTTT ACTTATCGGT TTGCTAAAGC GGCTGAGCAA
CTTGGGCTAG TGGTAATGGA TGATCCTGAA TCCATTATGA AGTGTACTAA TAAGGTGTTT
TTAACCGAGC TATTAAACAA ACATAAAGTA CCCGTACCCA AAAGTTTGAT CTTTAAAGCC
TCAGATAAAA ACTGGGCCGA TAATGTTATT GATACCATAG GATTACCAAT TGTACTGAAA
GTACCCGACG GCGCATTTTC GCTCGGGGTT GTTAAAGTAA AAGACCGTGA AACCCTACTC
GAACAAGCGG CGATAATCTT TGAGCACAGT GCGTTAATTT TAGCGCAGGC GTTTATGCCA
ACCGATTATG ACTGGCGTAT CGGCGTGTTA AATCGCCAAC CTATTTATGC CTGTCGTTAC
TTTATGAGTC GCGGTCATTG GCAGATTTAC CAACATCATC AAAGTGGTCG CGTCAGTAGT
GGTGATTTTG ACTGTATCGA TTTGAAGATG GTGCCACAAA ATATTGTCGA TGCAGCGGTT
AAAGCATCTA ATTTAATTGG TGCAGGCTTG TATGGTGTCG ATTTAAAAGA AATCGATGGT
AAAGCTTATG TGATTGAAGT GAACGACAAT CCGAGTATTG ATCATGGAGT AGAGGACTTG
TTTTTAGGTG ATTTAGTGTA TGACCGCATA ATGACTGAAT TTTTAAGGCG TATTCAGCTT
CGCGGCATGT AA
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| Protein sequence | MAHFLIVTDD VNDWRPYLPS DHMVTVHDYL EMGAFADQSA MQVINLCRSY DYLSTGYYCS
LMAEARGHRV IPRVMTINDL SQDRFFSLPQ SGLDKLPESV NEISMKLYFG YCDNPSLDKL
ARKIFERFTV PVLQVSLLKM SGKWQVNTIE PAAFQDLTEP EQDLFAKYLE VFSQKVWRLP
KPSKRYRYEI AMLVDEHEKM PPSDKAALKL FTKSANRIGM DLVQIGSHDL ARLSEFDGLF
IRSTTNISNF TYRFAKAAEQ LGLVVMDDPE SIMKCTNKVF LTELLNKHKV PVPKSLIFKA
SDKNWADNVI DTIGLPIVLK VPDGAFSLGV VKVKDRETLL EQAAIIFEHS ALILAQAFMP
TDYDWRIGVL NRQPIYACRY FMSRGHWQIY QHHQSGRVSS GDFDCIDLKM VPQNIVDAAV
KASNLIGAGL YGVDLKEIDG KAYVIEVNDN PSIDHGVEDL FLGDLVYDRI MTEFLRRIQL
RGM
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