| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0901 |
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| Symbol | |
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| ID | 4276998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1060404 |
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| End bp | 1061852 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638133667 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family protein |
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| Protein accession | YP_749592 |
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| Protein GI | 114562079 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.520731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTTGT ATAACAGCAA CCTAATTGGA CTCAAACATA TTCTAATGGA TAATATTTTA
ATTGTTGATG ACAATCACGC CATTTGCCAA GCGCTTGCGT TAATGATTGA ACTGCATGGC
TATCAGGCAA TTTTTTGTCA TTCACCAGAA GCTGCAGTTG AGATTGTCAC CAACAAAGAA
ATCAGCTTGG TGATCCAAGA CATGAACTTT AGCCGTGACA CCACCTCGGG TGAAGAGGGT
AAGCAACTGT TTTACGCATT GCGTCAGTTA CAGCCTAATT TACCGATTAT TTTAATGACC
GCGTGGACCC AATTAGAAAC CGCTGTCGAG TTGGTTAAAG CGGGAGCGGC CGATTACATG
GGTAAACCGT GGGATGACGC AAAGCTGCTC AATAGTATTA GTAACCTATT ATCAATTTAT
CGACTGTCTC AGCAAAATAG CCAATTAACC CGGATAGACA GTGAACGTAT GTCGGCTATT
AATGGCGCCG ATTTATGTGG CTTAATTTTT GGTAGTGGTG CCATGCAGCG CTGTGTTGAT
TTGGCATTGC AAGTTGCGCG ATCCGATGTG TCGGTGATGA TCACTGGCCC AAATGGTGCG
GGTAAAGACA AAATAGCCGA TATTTTACAG GCCAATTCGC CACTAAAAGA TAAACCTTTT
ATTAAGGTCA ACATTGGCGC TTTACCAATG GATTTATTAG AGGCCGAATT GTTTGGCGCA
GAAGCAGGTG CCTTTACGGG CGCTAATAAA ACCCGTATGG GCCGATTTGA AGCTGCCGAT
GGTGGCACTT TATTTTTAGA TGAAATTGGT AATTTGCCTT TATCTGGCCA AGTAAAGTTA
TTACGGGTAT TACAAACCGG TGAGTTTGAA CGTTTAGGCA GTCATCAAAC CCGCAAAGTG
AATGTGCGGG TGATTAGTGC TACCAACGCG GATTTAGCCG ACGACATTGC TCATGGGCGT
TTTCGAGAAG ACTTATTTTA TCGCTTAAAT GTCATTGAGC TAGCCATATC ACCATTGAAT
CAACGCCAGG ACGATATTTT ACCGTTAGTG AAACACTTTA TTGGTGCCAA TTTTAGCCTT
GATAAGTCGA CCCAGCAGGC GTTAATTAAT CATAGTTGGT CGGGTAATGT GCGTGAATTA
GAAAATGCCT GCAAAAGGGC GGCGCTGTTA GCTAAGTCAC CACTATTAAC GATTGATGAC
TTTGGCTTGA TGGCGATTGC TAATGGCGGC GCAGCTACCC AGCATGCGCT TGTTGTTGAA
CATCAACTTG GTCAACAAGA ACAGGGCATT GATGATACTC AGTCGATTTG CGAACCTGAT
AAGCAACAGC TAGAAGACGC CTTAGTGCAA TACAATGGCG TCATTGCCAG AGTAGCAAAA
TCCTTTGGCT TAAGCCGACA AGCCCTTTAT CGCCGTATGG AGAAATACGG CCTTAGGGTG
ACTAAATAA
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| Protein sequence | MFLYNSNLIG LKHILMDNIL IVDDNHAICQ ALALMIELHG YQAIFCHSPE AAVEIVTNKE
ISLVIQDMNF SRDTTSGEEG KQLFYALRQL QPNLPIILMT AWTQLETAVE LVKAGAADYM
GKPWDDAKLL NSISNLLSIY RLSQQNSQLT RIDSERMSAI NGADLCGLIF GSGAMQRCVD
LALQVARSDV SVMITGPNGA GKDKIADILQ ANSPLKDKPF IKVNIGALPM DLLEAELFGA
EAGAFTGANK TRMGRFEAAD GGTLFLDEIG NLPLSGQVKL LRVLQTGEFE RLGSHQTRKV
NVRVISATNA DLADDIAHGR FREDLFYRLN VIELAISPLN QRQDDILPLV KHFIGANFSL
DKSTQQALIN HSWSGNVREL ENACKRAALL AKSPLLTIDD FGLMAIANGG AATQHALVVE
HQLGQQEQGI DDTQSICEPD KQQLEDALVQ YNGVIARVAK SFGLSRQALY RRMEKYGLRV
TK
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