Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0742 |
Symbol | |
ID | 4278279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 870214 |
End bp | 871416 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638133513 |
Product | Rh family protein/ammonium transporter |
Protein accession | YP_749438 |
Protein GI | 114561925 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA TTAGTGATGC TATTGGCGTC ATTGCACAAA GTGCAGACAC CTTGTTCATC TTACTTGGTG CAATTATGGT GTTAGCCATG CACGCAGGCT TTGCATTTTT AGAAATGGGC ACCGTGAGGC ATAAAAACCA AGTTAACGCC TTGGTTAAAA TTCTAACTGA CTTTGCCTTT TCCGCTATCG CCTACTTTGT CATTGGTTAT CAAATAGCTT ATGGCAATCA CTTTTTTGTC AGCGCAGAAA GCTTAACCAC TGATAATGGC TACCAACTGG TTAAGTTTTT CTTCTTACTC ACATTTGCAG CAGCCATTCC AGCAATTGTA TCTGGCGGTA TTGCTGAACG CGGCAGCTTC AGACCTTTCT TATTGGCATC TGCTTTAATT GTTGCCTTCG TATATCCGCT ATTTGAAGGG ATTATGTGGA ACGGTAATTA TGGATTTCAA GCTTGGTTAG AAAGCCAATT CGGCGCCCAA TTTCATGACT TTGCCGGTTC CGTTGTAGTG CATGCAATGG GCGGTTGGTT AGCCTTAGTC GCCATTTACT TATTAGGAGC TCGCCGTGGT CGTAAACCGG GAATCGCATT TGCGCCATCA AATATTCCCT TTCTAGCGCT AGGCTCTTGG GTGTTAATTG TCGGTTGGTT TGGCTTTAAC GTTATGTCAG CGCAAACCCT CGACGGTATT AGTGGTTTAG TGGCGGTAAA CAGTTTAATG GCTATGGTTG GCGGTACGAT TGTGGCACTT GTGGTGGGTA AGAATGACCC AGGCTTTATT CATAACGGAC CACTAGCAGG CTTAGTTGCT GTGTGTGCAG GTTCTGACTT AATGCATCCT GTTGGCGCAT TTGTGGTTGG CGGTATAGCA GGAGGTTTGT TTGTTCTGGT GTACACCAAA TTACAGCGTA GCAACAGAAT CGATGACGTT CTAGGCGTAT GGCCACTACA CGGTTTATGC GGTGTATGGG GCGGTATTGC TGCGGGTATT TTTGGTCAGC AGGCTTTAGG TGGTCTTGGC GGGGTCAGCT TTATGTCGCA ACTCATTGGC AGTATTGCTG GCGTTGTGGT GGCAATTGTT GGCGGTATGA TTGTGTATGG CGCGGTTAAT AAAGTATCGA GTTTACGCTT AAGCCAAGAA GATGAATTTA TTGGGGCGGA TTTAGCGATA CATAAGATTG GCTCAACCAA TTCAGATAAG TGA
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Protein sequence | MNNISDAIGV IAQSADTLFI LLGAIMVLAM HAGFAFLEMG TVRHKNQVNA LVKILTDFAF SAIAYFVIGY QIAYGNHFFV SAESLTTDNG YQLVKFFFLL TFAAAIPAIV SGGIAERGSF RPFLLASALI VAFVYPLFEG IMWNGNYGFQ AWLESQFGAQ FHDFAGSVVV HAMGGWLALV AIYLLGARRG RKPGIAFAPS NIPFLALGSW VLIVGWFGFN VMSAQTLDGI SGLVAVNSLM AMVGGTIVAL VVGKNDPGFI HNGPLAGLVA VCAGSDLMHP VGAFVVGGIA GGLFVLVYTK LQRSNRIDDV LGVWPLHGLC GVWGGIAAGI FGQQALGGLG GVSFMSQLIG SIAGVVVAIV GGMIVYGAVN KVSSLRLSQE DEFIGADLAI HKIGSTNSDK
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