Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2628 |
Symbol | def |
ID | 4270673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | - |
Start bp | 2977824 |
End bp | 2978360 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638127387 |
Product | peptide deformylase |
Protein accession | YP_743458 |
Protein GI | 114321775 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.790989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTC TGGATATATT GGTTTACCCC GATCCCCGTC TGCGCGAGGT GGCCGCCCCC GTGGCGCAGG TGGATGATGA CATCCGGCGG CTGGCGGACG ACATGTTGGA GACCATGTAT GACGCCCAGG GCATCGGCCT GGCGGCCACC CAGGTGGGCG TCAACCAGCG GGTGGTCGTG ATGGACCTGG CCGAGGAGGG CGCACGCCAA CCGCTGGTCC TGATCAATCC GGAGATTCTG GACCGGGAGG GCGCCGCCAC GGGGCAAGAG GGCTGTCTGT CCATCCCCGG GTTCTATGAG GACGTGGAAC GCGCCGAGCG GATCCGCTTC CGCGCCCTGG ACCGCGAGGG GCGCCCCTGG GAGCAGGAGG CCGAGGGCCT GATGGCGGTG TGCGTGCAGC ACGAGATCGA CCACTTGGAC GGCAAACTGT TCGTGGACTA CCTCTCTGAG CTGAAGCGAA AGCGCATTCG GCGCAAACTG GAGAAGCTGG TGCGCCAGGG GCGGGTGAAC GTGGGCGGGC AGACGGGGCG GGCATGA
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Protein sequence | MAILDILVYP DPRLREVAAP VAQVDDDIRR LADDMLETMY DAQGIGLAAT QVGVNQRVVV MDLAEEGARQ PLVLINPEIL DREGAATGQE GCLSIPGFYE DVERAERIRF RALDREGRPW EQEAEGLMAV CVQHEIDHLD GKLFVDYLSE LKRKRIRRKL EKLVRQGRVN VGGQTGRA
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