| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1934 |
|---|
| Symbol | |
|---|
| ID | 4270135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2198702 |
|---|
| End bp | 2199868 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638126688 |
|---|
| Product | NnrS family protein |
|---|
| Protein accession | YP_742766 |
|---|
| Protein GI | 114321083 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3213] Uncharacterized protein involved in response to NO |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00282797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.473648 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC ACGATGCCAC CGCCTCCCGA CGCCCCCGCC GCATCCCGGC CGACCGGTTC
TTTTTCCCGG CAGCGGTGAC CTATGCCCTG GTGGCGGTGC CCCTGTCGGT TCAAGGCCTA
CTGGGCGACC CGGCCTGGGC CCCGGGCCTG GCCAGCCCCT TGGGTCACGG TCAGGGGGTG
TTGTTCGGCT TCGCGCTGGC CCTGGTGGCC GGCTTTCTGG TCACCCGGGT CTCCGCCGGC
ATCCTGGCCG CGCTGGCGGG GCTCTGGCTG CTGGGCCGGG TGGCGACACT TTGGCCCGCC
GGGATGATCG CGCTGGTACC GGACGCCCTG TTCGTGGTCC TGCTGGCCGT GCTGATCGTC
CCTCCCCTGC TCCGCCGGGC CAAGAAGTGG CGCAACCTGG CCTTCGGCTG GCTGCTGCTG
ACCATCTGCC TGGCCGCCCT CACCGCGCCG GTGCTGCGGC TGCTAACCCT GCAGGGGCCG
GCCTGGCTGC TGCTGCGGGA GGCGGTGTTG CTGTTCGCCC TACTGATGCT CTTTGTGGGC
GGGCGCATCA TCGCGCCCGC CGTCGCGGGT GCCATCGAAC GCCAGGGCGG CCGCCTGACG
GCACGGGTGC AACCGCGGCT GGAGGCGGCG CTGCTGATCC TGATGGCGGC GGCCGCGATC
GCCCTCGCGC TGCCGACGGC CGGCATACTG GCCGGCTCGC TGCTTTGGGC GGCGGCGGCC
CTGGCCGCCA TCCGCCTGCT CCGCTGGCGC CTCTGGCGGT GCCGCCACCG CCCGGACCTG
ATCACCCTGG GTATCGGCTA CGCCTGGTTG GTGGTTGGCA TCGCCCTGCT GGGCGCCCAG
CAGCTGGGCG CAGTGACACC GGGCACCGCC ACCCACGCCG TCACCGTCGG CGCGCTGGGT
CATCTCGCCA GCGCCGTGAT CACCCGCACC TGGGGGCATC GGCACCGCTG GCGGCCGGAA
CAGTACCGGT ACCTGCTGCC ACTCTCCGGG CTGCTCAGCC TGAGCGCCGC CGCCCGGCTG
CTCTGGGCGG ATACGGTCAC CGGCCTCTGG TTGGCGGCTG GCCTGTGGAG CCTCGCCCTT
GGGCTGTTGC TGGCCCAGAT GGTACGCATG GCCTGGCGGC CCGCCCCAAG ACCCGATTCC
CCCACCCACC CGTCGGAGAA CAGATGA
|
|---|
| Protein sequence | MNAHDATASR RPRRIPADRF FFPAAVTYAL VAVPLSVQGL LGDPAWAPGL ASPLGHGQGV
LFGFALALVA GFLVTRVSAG ILAALAGLWL LGRVATLWPA GMIALVPDAL FVVLLAVLIV
PPLLRRAKKW RNLAFGWLLL TICLAALTAP VLRLLTLQGP AWLLLREAVL LFALLMLFVG
GRIIAPAVAG AIERQGGRLT ARVQPRLEAA LLILMAAAAI ALALPTAGIL AGSLLWAAAA
LAAIRLLRWR LWRCRHRPDL ITLGIGYAWL VVGIALLGAQ QLGAVTPGTA THAVTVGALG
HLASAVITRT WGHRHRWRPE QYRYLLPLSG LLSLSAAARL LWADTVTGLW LAAGLWSLAL
GLLLAQMVRM AWRPAPRPDS PTHPSENR
|
|---|
| |