| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0650 |
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| Symbol | |
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| ID | 4268262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 704043 |
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| End bp | 706226 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638125399 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_741494 |
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| Protein GI | 114319811 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0732792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0253872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGG ACAACGGACT GTACCTCGCC CTCTCGCGCC CCGGCGTGGC GGAGGCCGAC
CTGCCCCGGG TCACCGGGTT CACCCTGGAT GAGCACCTCT CCCGGCCCTT CACCCTGACC
CTGGACCTGG TCCACCCCTC GCCCGATCTC GCCCCCGACG ACTGGCTTGA GCAGGGCCTG
GCACTGGCCA TCCATCAGGC CGGCCGCGTC ACCCGCCGGG TCCACGGCGT GGTCACCGAG
TTCCAGCGCG GCCGCACCGG CGCCCGGCGC ACCGCCTACC AACTGGTCGT CCGCCCCGCC
CTCTGGCGCC TTGCCCTGCG CCGCAACGCC CGCATCTTCC AGCACGCCTG CCCGCTGGAT
GTCCTCCACA CCCTGCTTTC GGAACATGGC ATCACCGACG CCGCCTTCGC CGTCCGCCAC
CGCCCCGAGC CCCGCGAGTA CCTGGTGCAG TACCGGGAGA GCGACCTGGC CTTTGTCCAG
CGGCTTGCCG CCGAGTTGGG CATCGTCTAC TTCCACGAGT TCGACGACAC CCCCGAGGGC
GGCCACCGCC CGGTGTTCAC CGATACCCAT CGGGGGTTGG GGCAGGCGGG CGAATGGGTC
TACCGCCCCC GCGCCGGCGG CGTAGCCGAG GGCCGTCATG TGCACACCCT GCGCGAGGCC
CACCGGGTGC GCGCGCAGCG CGCCACCCTG GAGGATCGCC ATTTCCGCAC CCCCCGGCGG
CGGCTGATCC ACGCGCAGGC GGTGGACGGG GCAGCCGGGC ATGATGGCGC CGAGTCGGGG
GCCACCCCCT ACGAGCACTA CGACCACCCC GGCCGGTTTA AGACCGAGAC CAGCGGCCGG
GCCTTCACCC GGGTCCGGCT CGGCCAGTTG CGCGCCGACG CCCACACCGC CGAGGCCGAG
AGCGATATTG CCGAGCTGCG CCCCGGCGTG CGCTTCACCC TCGATGGCCA CGACGCCGGC
GAACGGCGCC GCGACTGGCA GGTGGTCGGC GCCCGCCACA CCGCCCGCCA GCCCGCCGCG
CTGGAAGAGG ACGCCGTGCT GCTGGCCGCC GAGGGCAAGG GCGATGCAGC CGCAGGCGTG
GCCCGGCTGA ACAACCGGCT CACCCTTGTG CCCGCCGACA CCGACTGGCG CCCGCCCCAC
GACCCGGACG CCGGCCCGCG GATGGAAGGC CCGCAGATCG CCCGGGTGGT GGGCCCCGAG
GGGGAGGCGA TCCACTGCGA TGAGCACGGC CGGGTCAAGG TCCGTTTCCC CTGGGACCGC
TACGCCGCCG ACGACGAGCA CGCCAGCGCC TGGCTGCGCG TCGCCCAGCC CTGGGCCGGG
CCCGGCTACG GCGGGCTGTT CCTGCCCCGG GTGGGCCATG CGGTGATCGT CGACTTCCTG
GCCGGCGACC CGGATCAGCC GGTGATCACC GGCCGGGTCT ACGAGGGCCA CAACACCCCG
CCCTATCCGC TGCCCGAGCA CAAGACCCGC AGCGTGCTGC GCAGTCGCAG CCACGGCGGC
GAGGGCTACA ACGAACTGCA CTTCGAGGAC GCCCGCGACG CCGAGCGCAT CCACCTGCAC
GCCCAGCGCG ATCTCGACCT GCACACCCGC AACGACCGCT CCGAGACCAT CGGCCGGCAC
AGCCACCTGG GCGTCCACGG CGACCGGCTC GCGGAGATCC ACGGCGACGA GCACCTCACC
GTGCAGGGCG AGCGGCGCGA GCGCACTGCC GGTGATCAGC ATCTCACCGT GGAGGGCACG
CTGCATCAGC GCTTCGGCAC CTCTCAACTC GTTGAAACGG GCCGCGAGGT CCATTACAGC
GCGGGCAACA AGGTCGTTCT CGACGCCGGT GCCGAGATCA CCCTCCAGGC GGGCGGCAGT
TTCATCAAGC TCGACCCCTC CGGCATCACC CTCAGTGGCC CCGGCATCCG CATGAACTCC
GGGGGCCGAC CAGGCTCCGG GAGCGCCCAG CAGGCAGCGG TGCCGTTGTT GCCGGGCCAC
GCCGTCCCGG AGGTTCAATA CGGCGAGGCC GGTGCTGGAC CGGAGGCCTT GCTCGACGCA
CGAACGCTGG CACCCGACCA GCTGCGTCAG GCGGCCGGGC AAGATGCCGC CTTGGTGGTG
CAATGCCACC GGGGCCCGAA CGGCGACTGC CCGCTCGCCG ATTGCCCGTG CCCGACGGGT
CAGGACGACC CGGATCACGC CTGA
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| Protein sequence | MQTDNGLYLA LSRPGVAEAD LPRVTGFTLD EHLSRPFTLT LDLVHPSPDL APDDWLEQGL
ALAIHQAGRV TRRVHGVVTE FQRGRTGARR TAYQLVVRPA LWRLALRRNA RIFQHACPLD
VLHTLLSEHG ITDAAFAVRH RPEPREYLVQ YRESDLAFVQ RLAAELGIVY FHEFDDTPEG
GHRPVFTDTH RGLGQAGEWV YRPRAGGVAE GRHVHTLREA HRVRAQRATL EDRHFRTPRR
RLIHAQAVDG AAGHDGAESG ATPYEHYDHP GRFKTETSGR AFTRVRLGQL RADAHTAEAE
SDIAELRPGV RFTLDGHDAG ERRRDWQVVG ARHTARQPAA LEEDAVLLAA EGKGDAAAGV
ARLNNRLTLV PADTDWRPPH DPDAGPRMEG PQIARVVGPE GEAIHCDEHG RVKVRFPWDR
YAADDEHASA WLRVAQPWAG PGYGGLFLPR VGHAVIVDFL AGDPDQPVIT GRVYEGHNTP
PYPLPEHKTR SVLRSRSHGG EGYNELHFED ARDAERIHLH AQRDLDLHTR NDRSETIGRH
SHLGVHGDRL AEIHGDEHLT VQGERRERTA GDQHLTVEGT LHQRFGTSQL VETGREVHYS
AGNKVVLDAG AEITLQAGGS FIKLDPSGIT LSGPGIRMNS GGRPGSGSAQ QAAVPLLPGH
AVPEVQYGEA GAGPEALLDA RTLAPDQLRQ AAGQDAALVV QCHRGPNGDC PLADCPCPTG
QDDPDHA
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