| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2341 |
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| Symbol | |
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| ID | 4256895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2781069 |
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| End bp | 2782343 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123011 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_738385 |
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| Protein GI | 114047835 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000746143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0730107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTATC TTGCCGCCAG TATCGCCGCG TGTGTGAGCT TAAGTGCGTG TTCAAGCGCG
CCAACCTCGG GCGGTAATAG TCAAACCGCG ATCGCTGAGA CGCAGGCCGC CGTGCAAGAA
ATGCAGCTCA GTGACACCAT TGCCGCCCAT GCTGAGGCAT TTCCTACCTG TGTGGCTAAC
CTACAGGAGC GCGCACGTAG TGAAGGCTTA TCTGAAGCCA CCATCAAGGA CACTGTCGCC
AGTTTGCAGT TTGTGCCGAA AGTGATTGAG CTTGACCAAG CTCAGCCCGA GTTTAGCCAA
ACTTTCAACA ACTATTTTAC GAAGCGGGCG ACCGATTGGC GGGTGAATGA AGGCCGTCGT
TTACTGAAAA AACACCGCGC GCTGCTCGAT AAATTGGCGC AGGAATACGG TGTGCCGCCA
CAATATATTC TGTCTTTCTG GGGACTTGAG ACTAACTACG GTTCCTACAA AGGCAAAATG
TCCGTGTTAG ATTCTCTTGC TACCTTGGCC TGTGAGCCGC GTCGCAGTGG CTATTTTACG
ACTGAGCTGA TGCAAGCGCT TAAGTTAAAA GAAAAATACG GCTTTGATAA GCGCACTATG
GTGGGTTCTT GGGCCGGCGC CATGGGGCAC ACCCAGTTTA TGCCCTCGGC CTATGCTAAA
TATGCCATCG ATGGGGATGG TGACGGTAAG GCTGATTTGT GGAATAGCAC CGAAGATGCA
CTCACCTCGG CGGCAAACTT TTTGCAACAC TTAGGCTGGC AACGCAATGA GCGTTGGGGG
CGTGAAGTGA TATTGCCGCG CAATTTCAAC TATGAAAACC TGGGCGCCAA ACAGGCGCAG
CCGCTATCCC AATGGGCGGC GCAATCCGTA GTGCAAAGTA ATGGACTGCC TTTACCCGCT
ATCGATATGA AGGCGGCGCT GTATTTGCCC TCGGGTCATA CTGGTCCCGC GTTTTTAGGC
TATGAAAACT TCAATGTGAT CATGCGTTGG AACCGCTCTG AGTTTTACGC CATTACCGTT
GGTCATTTGG CCGATAGAAT TAATGGCGGC GAACCACTAA AAGTGGCACC GCCAGAGCAA
CCACGTTTGA GTCGTGAGCA AATCAAACAG TTACAAAGCA AGCTGAATGA ATCAGGCTTC
GATGTCGGTA AACCCGACGG CGTGCTTGGG CGTAACTCTT CGGCGGGGAT CCAGGCATTC
CAGCGCAGTA AGAATATGAT TGCCGACGGT TTCCCAAGCC CTGAAGTCTT TAGCGCATTG
GGGATTTCAC TCTAA
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| Protein sequence | MSYLAASIAA CVSLSACSSA PTSGGNSQTA IAETQAAVQE MQLSDTIAAH AEAFPTCVAN
LQERARSEGL SEATIKDTVA SLQFVPKVIE LDQAQPEFSQ TFNNYFTKRA TDWRVNEGRR
LLKKHRALLD KLAQEYGVPP QYILSFWGLE TNYGSYKGKM SVLDSLATLA CEPRRSGYFT
TELMQALKLK EKYGFDKRTM VGSWAGAMGH TQFMPSAYAK YAIDGDGDGK ADLWNSTEDA
LTSAANFLQH LGWQRNERWG REVILPRNFN YENLGAKQAQ PLSQWAAQSV VQSNGLPLPA
IDMKAALYLP SGHTGPAFLG YENFNVIMRW NRSEFYAITV GHLADRINGG EPLKVAPPEQ
PRLSREQIKQ LQSKLNESGF DVGKPDGVLG RNSSAGIQAF QRSKNMIADG FPSPEVFSAL
GISL
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