| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2003 |
|---|
| Symbol | |
|---|
| ID | 4258689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2368273 |
|---|
| End bp | 2368932 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638122670 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738049 |
|---|
| Protein GI | 114047499 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.026814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000326951 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGC AAACCTTGTA CTCAGCGAGT GCATCCACCT TCGAAGTGAA TAAACTTCTT
AAAAATACCT ATTTATTATT GGCCATGACC CTCGCCTTCT CGGCATTGTG TGCAGGCTTA
GCGATGGCAC TTAATATCAG CCCTCTGATG TCACTCGGTT TATCTATCGG TGGTTTAGTG
CTGTTGTTCG TTACCCTACG CAAAGCCGAC TCGGCTGCGG GCATCTTCTG GGTATTTGCC
TTCACCGGTA TGGAAGGCGC CTCATTAGGT TACATGCTTA ACCACTACGC TGGCATGACC
AATGGCTCTG AGCTTATCAT GCAAGCTTTA GGATTAACCT CGGTTATCTT TATTGCGCTC
TCAGCCTATG CAGTCACAAC GAAGAAAGAT TTCTCTTTCC TACGTGGTTT CCTGTTCGCC
GGATTGATTG TGGTGATCGC CGCTGCGCTG ATTAACATTT TCGTGGGTAA CAGTGTGGCC
TTTATGGCGA TTAACGCGGG TCTTGCGCTG TTAATGACCG GCTTTATCCT GTTCGATACT
AGCCGTATCG TGAATGGTGG CGAGACTAAC TATATCCGCG CCACTATCTC CTTGTATCTG
GACTTTTTAA ACCTATTCAT TGCCATTTTG CATTTGCTTG GCATTGGTAA CGATGATTAA
|
|---|
| Protein sequence | MTQQTLYSAS ASTFEVNKLL KNTYLLLAMT LAFSALCAGL AMALNISPLM SLGLSIGGLV
LLFVTLRKAD SAAGIFWVFA FTGMEGASLG YMLNHYAGMT NGSELIMQAL GLTSVIFIAL
SAYAVTTKKD FSFLRGFLFA GLIVVIAAAL INIFVGNSVA FMAINAGLAL LMTGFILFDT
SRIVNGGETN YIRATISLYL DFLNLFIAIL HLLGIGNDD
|
|---|
| |