| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3104 |
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| Symbol | |
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| ID | 4253675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3714532 |
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| End bp | 3715467 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119746 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_735232 |
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| Protein GI | 113971439 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAAA CCATACTCGG AGCCAACGGC CAAATCGGCA GAGAACTAGC CCTTAGCCTT
AACCGCGAGT TTGACTGTGA CATTCGCCTT GTTAGCCGCA AGCCGCAAAA AGTGAATGCC
ACGGACGAGT TAAAGAGCGC CAACCTGCTC GACTTAGCAC AAACCTTAGC CGCGGTGGAA
GGCTCTGAAA TCGTTTATCT CACGGCGGGA CTGCCTATGG ATACTCAGCT TTGGGTCGAG
CAATGGCCTG TTATCATGGG TAATGTTATC CAGGCCTGTA AGACTCACGG CGCCAAGCTG
GTGTATTTCG ATAATACCTA TATGTATCCG CAAACAGCGG CGCCGCAGCG CGAGGATGCA
GCATTTGCGC CCAATGGTGC CAAAGGCCGC GTGAGGGGCG AAATCACCCA AATGTTACTC
GATGAAATCC ATGCGGGGCG ACTCGAGGCG ATGATCTGCC GCGCGCCAGA ATTTTACGGC
CCTGGCCAAA CCCAGAGCAT TACCAATACC ACGGTTATCG ACAATCTCGC CCAAGGGAAA
AAGGCCAAAG TGTTTTTGCG TGACGATACG AAACGCAGTT TGATTTACAC CCCAGATGCC
AGCCGCGCCA TGGCCTTACT CGGGAATACT CCCGATGCCT ATGGCCAAAC ATGGCACTTA
CCCTGTGATG ACAATAGGCT GACCTATAAG GAATTTATTA CTCTTGCTGC CGACATTTTT
AAAGTGCCGG CTCGATATAC TGTGGTCAAA GAATGGCAAC TGTGGCTCGC GGGTAAATTC
AATCCCACCA TACGAGATGC GGGAGAGTTG CTGCCCCGTT ATCGCTGCGA CAATCTATTT
ATTTCCGATA AATTTAAAGC CCATTTCCCT GATTTTAAGG TCACTCGCTT TGCACAAGGG
TTGGCTGAAA TCGCCAAGGA GCGCCAGTTA ATCTAA
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| Protein sequence | MRQTILGANG QIGRELALSL NREFDCDIRL VSRKPQKVNA TDELKSANLL DLAQTLAAVE
GSEIVYLTAG LPMDTQLWVE QWPVIMGNVI QACKTHGAKL VYFDNTYMYP QTAAPQREDA
AFAPNGAKGR VRGEITQMLL DEIHAGRLEA MICRAPEFYG PGQTQSITNT TVIDNLAQGK
KAKVFLRDDT KRSLIYTPDA SRAMALLGNT PDAYGQTWHL PCDDNRLTYK EFITLAADIF
KVPARYTVVK EWQLWLAGKF NPTIRDAGEL LPRYRCDNLF ISDKFKAHFP DFKVTRFAQG
LAEIAKERQL I
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