Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3093 |
Symbol | |
ID | 4253664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3701473 |
End bp | 3702888 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638119735 |
Product | peptidase M16 domain-containing protein |
Protein accession | YP_735221 |
Protein GI | 113971428 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0599464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCAT ACCTTAGCGG TTATTTTGGC CTAGTTATCG CGTTGCTTAG TCCTGCGCTT AAGGCGCAGT GCCAGATAAC GGGCACCGAG CGACTGTATC AACTCGAGTC GCAAATTGAG ACTTACACTT TGGCCAATGG CCTCACTGTG CACCTCTTGC CACAAGCGGA TAAGCATACC CTGACCATTG CCAGCCAATT TAATGTCGGC GCGCGCAACG AGGCCAAGGG CCAAACTGGC TATGCGCACT TATTCGAGCA CATGCTCTTC AAGGGCAGTG AGCAGGCTCC CGGCGACAGC TATGCCCAGC AGTTAAGTGC CCTTGGGGCG CGTTTTAACG CCAGCACCCA TTTCGATTAC ACCAATTATT ACGTCACTCT ACCCAGCCAA GCCCTCGGCT TAGGGCTGTT CCTCGAGGCC GATCGTTTTA TTCGCCCCGA TTTGAACCAG ACTACGGTGA AAAATCAGCA GGAAACCGTG CTCCAAGAAA TGGCGCAAAC CATAGATAAC CAGCCCTACG TGCGCAGTGC GATGGAATTT TTACTAGAGC AGGTTAAGGA TACGCCCTAC GGCCACGGTA TTATTGGCAG TCGTGAGGAT ATTACCGAGG CAAGTCCCGA GCGTTTAACC GCCTTTCATC GCGACCATTA TCGTCCCGAT GCGATGCAGT TATCCTTAGT CGGCAAGCTT CCCTCCGACG TTAAGTCGCT TATAGCACAA TACTTTAATG CTTGGCCCAC ACCTAGTCAG CCCATAGCCG AATTTGATGA GCTGAAAATC CCCCCCAAAC CCGTGCATGC AGAGCTTATC GATGAGCGCG GTCCTTGGCC CGGCTTACTG CTCGCCTGGC ATACTGTGGG TAAAAATCAT CCCGACGCCG CCGCGATTCG CCTGCTCGAA GGCGATTTAT TTCAAAATAC CCGCAGCGCC ATAGCGCAAA TCAGCCAGCA CGATCCGGCA CAAATGTTAA GTTATTCACT GCCCTTTGAG CTGGAAAATC ATGGCATAAC CAATCTGGTC TTAGTGCCTC GGGCCAAAAC CTCCCTCGAT GACTTAACGG AAAAGGTTTT AGGCGTGGTT GCTAAAGTGC AGCAGACACC ATTGAGCGAC GCAGAACTAT GTCAACTCAA ACAGACCTGG CTGAACAATC AGCTAGCGCT GCTCGATAAC ACTCAATCGC TCGCCACCCT GTTATCCGCC ACGGCGAAAC AAGACCAAAT ACATCCTTTA ACGGCCCAGT GGCAACGGAT TAACTCCGTT AGTGCAGAGG ATATTCAACG GGTGGCCACG CGATACTTTA CCACCGATAT GGTCAGGGTT GACCTGTTAC CGCCTTGGTA TATCCGCGTA GGAAAGACAT TGCTGGAGTG GCTGCCATCG GGTGTGAGCG ATAGCCTTGA GGACGCGGTA CTATGA
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Protein sequence | MRPYLSGYFG LVIALLSPAL KAQCQITGTE RLYQLESQIE TYTLANGLTV HLLPQADKHT LTIASQFNVG ARNEAKGQTG YAHLFEHMLF KGSEQAPGDS YAQQLSALGA RFNASTHFDY TNYYVTLPSQ ALGLGLFLEA DRFIRPDLNQ TTVKNQQETV LQEMAQTIDN QPYVRSAMEF LLEQVKDTPY GHGIIGSRED ITEASPERLT AFHRDHYRPD AMQLSLVGKL PSDVKSLIAQ YFNAWPTPSQ PIAEFDELKI PPKPVHAELI DERGPWPGLL LAWHTVGKNH PDAAAIRLLE GDLFQNTRSA IAQISQHDPA QMLSYSLPFE LENHGITNLV LVPRAKTSLD DLTEKVLGVV AKVQQTPLSD AELCQLKQTW LNNQLALLDN TQSLATLLSA TAKQDQIHPL TAQWQRINSV SAEDIQRVAT RYFTTDMVRV DLLPPWYIRV GKTLLEWLPS GVSDSLEDAV L
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